Dactylococcopsis salina: Dacsa_0982
Help
Entry
Dacsa_0982 CDS
T02378
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsl03400
]
Dacsa_0982
DNA repair and recombination proteins [BR:
dsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dacsa_0982
Archaeal homologous recombinant proteins
Dacsa_0982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_27
AAA_29
AAA_21
ABC_tran
HIP1_clath_bdg
KDZ
Motif
Other DBs
NCBI-ProteinID:
AFZ49707
UniProt:
K9YTA6
LinkDB
All DBs
Position
983151..986168
Genome browser
AA seq
1005 aa
AA seq
DB search
MIPQQLILSNFLSYQQANLDFTGLHTACICGANGAGKSSLLEAITWVLWGKTRATSDEEV
INSTAKEAQVDFRFQYNGDTYRVLRSRKKGQSASLELQVQNSNDQFQSLTAKGVKATQKK
INELLKLDYDTFINSAYLRQGRADEFMLRSPSQRKDVLAELLKLDQYQTLAEDAKGISRT
LKGQTDQLEQSLAPTEQELEQKKTIQQQLETINQNYQQLQSTQEKDQAQFQQLQTLDSQR
QTKQEQVNWYQQQDQTFSKECEKLREQQSKLETSLSQISQLLEQESLINQNYQQYLDLQK
EQETLSEKFQTYQDLQQQRQQIQQQQQATINQLKLQQQRLETELENLQTEEQATQKILQQ
SDEINQALNALKKARQRLKELDQLQQEVSPLIQRRQTLQVEIEREAARRKARLEQIESNQ
QELQQELAKFPDRETEYNTIQEKLEALKKKQNYSQRIQEKRQQQQSIQERLKQEEKNYEK
QLADLVKKLELLQNPQASCPLCERPLDTEHKQRVTAKTNREYETIQTEKETIWEDLAKSK
RELDKYTQEYEAISEELAEYDHLVSRSGQLESYFDEVCDLHEKISNLKQEKREIENALET
QNYAETYQTELQNIEQRLGEINYDEKTHAVAREKVDNLRYADRKGEQLEEAKKQVKRINE
RKPVLETKLKEVQQKITDAEREETEKLQNIDQAITDLGYTRSRHNEIITAIKEKQNSQLQ
YQKLQQAKADYPQKQQELTEVKESLASKEQEKANCQQQLENLTAELAKITDVREEMEKLK
AKIQQQRQQLDQLISEKGKLEQKLNYLEELKAKYQNAKEELKTLKRKQTIYNELSQAFGK
NGIQALMIENVLPQLEAQTNRILTRLTGNQLHVQFLTQKAGKGRSKKQAKLIDTLDIIIA
DTQGTRAYETYSGGEGFRINFAIRLALAKLLAQRAGTALQLLIIDEGFGTQDAEGCERLI
SSINAIAPEFSCILAVTHMPQFKEAFQHRIEVTKTADGSQISVFS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaacaattaatcctttctaacttcctgagttatcaacaagcaaatctcgat
tttactggactccataccgcttgtatttgtggcgcaaatggtgcgggaaaatcatccctc
ctcgaagcaattacttgggttttatgggggaaaactcgtgcgacttccgatgaagaggtt
ataaatagcaccgcaaaagaagcacaagtagattttagatttcaatacaatggtgacact
tatcgagttttacgcagccgcaaaaaaggacaaagtgcgtctttagagttacaagttcaa
aacagtaatgatcagtttcaatcattaaccgcaaaaggcgttaaagccactcaaaagaaa
attaatgaactgctgaaacttgattatgatacgtttattaattcggcttatcttcgacaa
ggacgtgcggatgagtttatgttacgttctcccagccaacgaaaagatgttttagcagaa
ttactgaaacttgatcaatatcaaactttagcagaggatgcgaaaggaatttctagaacg
ctgaaaggacaaactgatcaattagaacaaagtttagccccgacggaacaggaattagaa
caaaaaaagacgattcagcaacagttagaaacaattaatcaaaactatcagcagttacaa
tcaactcaagaaaaagaccaagcacaatttcaacagttacaaacgttagattctcaaaga
caaacgaaacaggaacaagttaattggtatcagcaacaggatcaaactttttctaaagag
tgcgaaaaattaagggaacaacaatctaaactggaaacaagtctttctcaaatcagtcag
ttgttagaacaagaatctttgattaatcagaattatcagcaatatctcgatttacaaaaa
gaacaggaaaccctttccgagaaattccaaacttatcaagatttacaacagcaacgtcaa
cagatacagcaacagcaacaagcgacaattaatcagttaaagttacagcaacaacgctta
gaaactgaattagaaaatttacagactgaggaacaagctacacaaaaaattctccaacaa
tcagatgagattaatcaagcattaaatgcgctgaaaaaagctcgtcaacggcttaaggaa
ttagaccaactccaacaagaagtttctccgcttatccaacgtcgtcaaaccctacaggta
gaaattgaacgggaagcagcgcgacgaaaagcacggttagaacagattgaaagtaatcag
caagagttacaacaagagttagcaaaatttcctgatcgagaaactgagtataacacaatt
caagaaaaattagaagcactgaagaaaaagcagaattattcccaacgcatacaggagaaa
agacaacagcagcaaagcatccaagaaagactaaaacaagaggaaaaaaactatgagaaa
cagttagcggatttagtgaaaaagttagagttattacagaatccacaagcgagttgtcca
ttatgtgaacgtcctttagatacggaacataaacagcgtgttactgctaaaacgaatcga
gaatatgagacaattcaaacggaaaaggaaacgatttgggaagacttagcaaaatcgaaa
cgcgagttggataaatatactcaagagtatgaagctattagtgaagaattagccgaatat
gatcacttggtttctcgtagtggacagctagaatcttactttgatgaggtttgtgatctc
catgaaaaaatttctaatttgaagcaagagaaacgggaaatagagaacgcattagagacg
caaaattatgcggaaacctatcaaacagagttacaaaatatagaacagcgtcttggtgag
attaattatgatgaaaaaacgcacgctgtcgcacgagagaaggtggataatttacgttat
gctgaccgtaaaggggaacagttagaggaggcgaaaaaacaagttaaacgcattaatgaa
cggaaaccagtattagaaactaagctgaaggaagtccaacaaaagattacggatgcggaa
agagaagagacagaaaagttacaaaatattgatcaagcaattacagatttaggttacacc
cgatcgcgccacaatgaaattataactgctatcaaggaaaaacaaaacagtcagcttcaa
tatcaaaaactccaacaagccaaagcagattatcctcaaaaacaacaggaattaactgag
gttaaggaaagtctagcgagtaaggaacaagagaaagccaactgtcagcaacaactggaa
aatctcaccgcagaattagcaaaaattactgatgttcgggaagagatggagaagttaaaa
gcgaagattcaacaacagcgtcagcaattggatcagttgatatcagagaaaggaaaatta
gagcaaaaattaaactatctagaggagttaaaagcgaagtatcaaaacgcaaaagaagag
ttaaaaaccctgaaacgtaaacaaacgatttataatgaattgtcgcaagcatttgggaaa
aatgggattcaagcgctgatgattgaaaacgttttaccccaactagaagcgcaaacgaat
cgcatattaactcgcttgacagggaatcagcttcatgtacagtttttaactcaaaaggct
ggaaaaggtcgatcgaaaaagcaagccaaactcattgatacccttgatattatcatcgcg
gatactcaaggcacaagagcttatgaaacctattctggaggtgaaggatttcggattaat
tttgccattcgtttagccctagcgaaactcttagcacaacgcgcgggaactgctttacaa
ttgttgattatagatgaaggatttggtacacaagacgcagaaggatgtgaacgtttaatt
agttcaattaatgcaattgcgcctgaattttcctgtattcttgcggtgactcatatgcca
caatttaaagaggcgtttcagcatcggattgaggtgacaaaaaccgcagacggatcacag
atttctgttttctcttaa
DBGET
integrated database retrieval system
