Dactylococcopsis salina: Dacsa_1800
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Entry
Dacsa_1800 CDS
T02378
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
dsl
Dactylococcopsis salina
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsl03021
]
Dacsa_1800
03009 Ribosome biogenesis [BR:
dsl03009
]
Dacsa_1800
Transcription machinery [BR:
dsl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Dacsa_1800
Ribosome biogenesis [BR:
dsl03009
]
Prokaryotic type
rRNA transcription factors
Dacsa_1800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_NusA_C
Phyto_Pns9_10
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFZ50458
UniProt:
K9YWF7
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All DBs
Position
1828582..1829784
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AA seq
400 aa
AA seq
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MATVSLPNLGKMINDISEGHNLPPSAVKIALQEALLKGYERYRRSQTLDRDQFDDDYFDN
FEVQLDLEEEGFMVLATKEIVESVSNSDHQIGLKEVKEVAEEAELGDTVVIDVTPQQKDF
GRMAAIQTKQVLMQKLRDQERKMIQEEFQELEETVLQARVVRFERQSVIMAVTSGYGRPE
VEAELPIKEQLPNDNYRANAAFRVYLKKVRDGVGKGPQLIVSRASAGLVAYLFENEVPEI
QDEVVRIVAIAREANPPSRHVGSRTKLAVDTLDRDIDPVGSCIGARGSRIQAVVNELRGE
KIDVIRWSPDPEIYIKNALSPAQINRVVLMDTEERHAQVIVPGNQLSLAIGKDGQNVRLS
AHLTGWKLDIKEAGKQEEEAEIVEEFSPDSEATVEALGSE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgttagcctcccgaatttagggaaaatgattaacgacattagcgaaggacat
aatcttccccctagcgctgtaaaaatcgcccttcaagaagccttattaaaaggatacgaa
cgttatcgccgttctcaaaccctagatcgcgatcaatttgatgatgactacttcgataac
tttgaagttcaactcgacttagaagaagaagggtttatggttctcgccactaaagaaatt
gtggaaagcgtttctaactccgatcatcaaattggactgaaagaagtcaaagaagttgcc
gaagaagcggaattaggagacaccgttgtgattgatgttactccgcaacaaaaagacttc
ggacgcatggctgccattcaaaccaaacaggtactgatgcagaaactccgtgatcaagaa
cggaaaatgatccaagaggagtttcaagaattagaagaaacggtgttacaagcgcgagtg
gtacggtttgaacgtcaatctgtgattatggcggtgactagcggttatggtcgtcccgaa
gtggaagcagaacttcccattaaagaacaacttcccaatgataattaccgcgccaatgct
gcttttcgcgtttatctcaaaaaagtccgcgatggggtgggaaaagggccacaattaatt
gtatctcgtgcttctgctggtttagtggcttacttgtttgaaaatgaagtcccagaaatc
caagatgaagtggtgcggattgttgcgatcgcgcgggaagcgaatcctccttctcgtcat
gtgggttctcgcaccaaattagccgtagataccctcgatcgagatattgaccccgttggg
tcttgtattggcgcgagagggtcaagaatccaagccgtagtgaacgaattacggggagaa
aaaattgatgtgattcgttggtcgccagaccccgaaatctatatcaaaaatgctctcagt
ccagcacagattaatcgtgtggtattaatggatacggaagaacgccacgcacaagtgatt
gttccgggtaatcaactcagtttagccattgggaaagatggacaaaatgttcgtctcagc
gctcatctcaccggctggaaacttgatatcaaagaagctggtaaacaggaagaagaagca
gaaattgtggaggagttttctcccgactcggaagcaacagtagaagcgttgggaagtgaa
taa
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