KEGG   Dactylococcopsis salina: Dacsa_2346
Entry
Dacsa_2346        CDS       T02378                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dsl  Dactylococcopsis salina
Pathway
dsl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dacsa_2346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsl03019]
    Dacsa_2346
Messenger RNA biogenesis [BR:dsl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Dacsa_2346
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RNase_J_C Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AFZ50957
UniProt: K9YWR9
LinkDB
Position
complement(2381386..2383302)
AA seq 638 aa
MSQPIKNQNKPIIKKKQPMSNNESQSNLRIIPLGGLHEIGKNTCIIEYEEEMILLDAGIG
FPDEGMHGINVVLPDMTYLRENQHKIKGMIVTHGHEDHIGGIVYHLKQFEIPVIYGPRLA
LALLQNKLEEAGIADQTILKPVLPRETVKLGSAFSVEFIRNTHSIADSCCVAMTTPLGVV
IHTGDFKVDHTPVDGEHFDFHRLAEYGEKGVLCLLSDSTNAESPGHTPSEESVRPNLDRV
FAEAEGRLFLTTFASSVHRVSIILDLAQKHNRVVGVVGRSMLNVIAHARNLGYIKCPDDL
FVPLKELNKIPDERVVILTTGSQGETMAALTRISKGEHRQVRIKPNDTVVFSANPIPGNT
IAVVNTIDRLMMIGAKVIYGRQLGIHVSGHGSQEDHKLMLALTKPKFFVPFHGEHRMLVK
HAGMAHQMGIPKENMVIINNGDVVELSRDRIQVTDQVQSGIELVDHSGIVHKDIMSERQQ
LALDGLITVAVAVGSNGEVLAQPEVNLRGVVSPLAPAKITDLIVRSVEQTIEKYWGNLAT
NGNGKPIDTDIDWTGLKVEIETGLKRMLRRELKSQPTTVCLLQTPRGKQVKAKSNGKLPQ
PVKSNSSDNNGNGNGNGVEVKQDFRGRRRRRRSASVSS
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgtctcaaccaatcaaaaatcaaaacaaaccaatcatcaaaaagaaacaacccatgagt
aacaatgaatcacaatctaacttgagaattattcctctcggtggattgcacgaaatcgga
aaaaatacctgcatcattgaatatgaagaggaaatgatcctattggatgcgggaatcggt
tttcctgatgagggaatgcacggaattaatgtggttttacccgacatgacttatttacgg
gaaaaccagcacaaaattaaaggaatgattgtcactcatggccatgaagaccatattggt
ggcattgtttatcatcttaaacagtttgagattccagtgatttatggcccccgtctggct
ttggcgttattgcaaaataagctagaagaagcgggaatcgcggatcaaaccatcttaaaa
cccgtgcttccccgtgaaaccgttaaactcggtagtgcgttttcggtggagtttattcgc
aacacccattccatcgcggatagttgctgtgtggcgatgacaactcctctcggtgtggtc
attcatacaggagatttcaaggtggatcatacgccagtggatggggaacattttgatttc
catcgtctcgccgaatatggggagaaaggggtgttatgtttattgagtgattctaccaac
gcagaaagccctggacacacgccttctgaggagtcagtccgaccaaatctcgatcgcgtt
tttgccgaagcggaggggcgcttattcctcactacgtttgcgtcttctgtacatcgggtg
agcattattctagatttagcacaaaaacataaccgtgtcgtgggagttgtgggtcgatcg
atgctgaatgtcatcgctcatgctcgtaatttaggatatatcaaatgtcccgatgatttg
tttgtccccttaaaagaattaaataaaattcccgatgaacgagtggtgattctgacgact
ggttctcaaggggaaaccatggcggcgttgaccaggatttctaaaggagaacaccgtcag
gtgagaattaaacccaatgataccgttgtgttttccgcgaatcccattcctggcaatacg
atcgcagtggttaacacgatcgatcgactgatgatgatcggcgcaaaagtgatttacggt
cgccagttagggattcatgtgtcgggacacggttcacaggaagatcacaagttaatgtta
gcgttaacgaaaccgaaattctttgttccgtttcacggcgaacatcggatgttggtgaaa
cacgcaggaatggcgcatcagatggggattcccaaagaaaacatggtcattattaacaat
ggtgatgtggtagaactgtcgcgcgatcggattcaggtaaccgatcaggttcaatcagga
attgaattagtcgatcattcgggtattgttcacaaagatattatgagtgaacgtcagcaa
ctggctttagatggtttaattaccgttgcggttgctgtggggtcaaatggtgaagtttta
gcgcagccagaagttaatcttcgtggtgtcgtcagtcccctcgcgccagcaaaaattacc
gatttgattgtccgtagtgtggaacaaaccattgagaaatattggggaaatttagccacc
aatggtaacgggaaacccattgacactgatatcgactggacaggattaaaagttgagatt
gaaacaggtttgaagcgaatgttgcgacgggagttgaaaagtcaacccacaaccgtctgt
ttgttacaaaccccaagagggaagcaagtaaaagcgaaaagcaatggtaaacttccgcaa
cccgtgaagagtaactctagcgacaacaatggtaatggtaatggtaatggcgttgaggtg
aaacaagattttcgcggtcgtcgtcgtcgtcgtcgatcggcttcggtttcctcttaa

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