Dactylococcopsis salina: Dacsa_3027
Help
Entry
Dacsa_3027 CDS
T02378
Name
(GenBank) DNA/RNA helicase, superfamily II, SNF2 family
Organism
dsl
Dactylococcopsis salina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Intein_splicing
Helicase_C
LAGLIDADG_3
ERCC3_RAD25_C
DUF1967
LAGLIDADG_WhiA
Hint
HA
Ribosomal_L27e
Motif
Other DBs
NCBI-ProteinID:
AFZ51564
UniProt:
K9YXB6
LinkDB
All DBs
Position
complement(3102852..3106826)
Genome browser
AA seq
1324 aa
AA seq
DB search
MTKLHGIWLSSSQEQTFFIWGETWRSCEGILKPDLPQDHPFLLSESELSNLLVQQQISRD
QLTNYSSQSLTLPTEEIKKKSVLPLLSQQTPQSPEKVSFQTWQVWGYRLPIASLFPLLST
TTESDSIKFWSHLFRWSDQLLARSKLLPQLEVQPQGKAITAWQPLFDAPIDQERLQTFAQ
HIPESCRSYNFNLSPEAIVIDFLSAVINTRIRDSSTPAFPPVTTPLLKQWFLALSSDDSS
FSTDEVSLRRLEKALKIWIAPVENYLGKNYLETIVHKPFRPCFRLLPPSESNENWYLEYG
LQSRDDEENFLDAETIWNTATDEIIKDGKTIKQPQETLLQGLGLALRLYPTIHDSLQHST
PTGCSLDPIQAYEFIRASAWRLSENGFGVILPPGLAPGSGERRLGVKVKAQAPKKGQKLG
LQSLLNYKWELAVDEETLSPQEFKQLLDQQSPLVEVNGKWLALQPSDVKAAQTLLKGSDA
EMNLSVEDAVRLTSGESQTMGKLPIVDFEASGALQELITNLSGNQSLTPVATPQDFCGDL
RPYQARGVSWLAFLQKWGLGGCLADDMGLGKCVSPETLIFLNGNLWTAEKIWEEFGIETI
EDGEGVWAQPSQSLWVNSIDHSTNKIVPALITRLYRQQVQEKLRKIRLQDGETITITQQH
KLLTSQGWTNQLQVGDYVAVPAKYSWEGKSVDLELVELIAWQMAKELSLNSQDQVIPNLI
MNADLEGVSYFLCHYFKAKGSVNEETGSIEFASDSLMVMKQLSVLLKRFGIWLKVSQQPN
CVTDGGNRERTYYAGSFAGNSARILSRYLGWETENQSNQSSQFEEASVSTLVKEREEQLF
YSRIESIEEINYEGWVYDFEIAEHHNFIANNIICHNTIQTIALLLHLKEKEELNAPTLLV
CPTSVLGNWEREVAKFSRNFSSLVHHGEKRKKGKPFVKQVQGYDLVITSYALAQRDATTL
KNVSWEAVILDEAQNIKNPQAKQSKAVRELEANFRIALTGTPLENRLSELWSILDFLNPG
YLGSQQFFQRRFATPIEKYNDRDSLQTLRSLVQPFILRRVKTDRTIIQDLPEKQEMNVYC
GLSQEQAQLYQEIVEKALKDIEAAEGIKRHGKILTLLVKLKQLCNHPALLQKEKQLITPQ
RSGKLLRLTEMLEELTAENDRALIFTQFAEWGKQLKAYLEQHFHCNIPFLYGATRKQQRE
AMVDQFQNDPDAPPIFILSIKAGGTGLNLTRANHVFHVDRWWNPAVENQATDRAFRIGQK
QNVQVHKFICTGTLEERINEMIESKKQLAEQTVDAGEDWLTQLDTEQLRDLVLLDRQAVM
DSDQ
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagttacacggaatttggctgtcatcatcacaagaacagacgttttttatttgg
ggagaaacttggcggagttgtgaaggaatcttaaaaccagaccttccccaagatcatccc
tttctcctcagtgaaagtgaactgagtaatctgttagtccaacagcaaatttcccgtgac
caactcacgaattacagcagccaatctttgacgcttccaacggaagaaattaagaaaaaa
tctgtccttcctcttttgtcgcaacagactccccaatcgccagaaaaggtgtcttttcaa
acttggcaggtttggggatatcgtctccccattgcgtcgctttttccgttgttatccact
accacagaaagcgatagtatcaaattttggtcacatcttttccgttggagtgatcaactg
ttagctcgatcgaagctgttaccacaattggaggttcaacctcaaggaaaagccataacc
gcttggcagcctttatttgatgctcccatagatcaagaacgtttacaaacttttgcccaa
catatcccagaaagttgtcgttcttacaactttaacctttccccagaagcgatcgttatc
gactttctcagcgctgttatcaatacccgtattcgtgacagttctactcctgcttttcct
cccgttaccactcctcttctcaaacaatggtttctggcgctttctagcgatgattccagt
ttctccacagatgaagtcagtttgcgtcgtttagaaaaggcgttaaaaatttggatcgca
ccagtagaaaattatttagggaaaaattacctcgaaacgatcgttcataaaccctttcgt
ccttgttttcgtttgcttcccccttctgaaagtaacgaaaattggtatctagaatatggc
ttacaatctcgtgacgatgaagagaactttctcgacgcagaaacgatctggaataccgcc
acagatgaaatcataaaagacgggaagacaatcaagcaacctcaagaaaccttactacaa
ggattagggttagcgttgcgattatatcccaccatccacgacagtttacaacattctaca
cccactggttgttcccttgatccgattcaagcctatgagtttattcgcgcgagtgcctgg
cgtttatcagaaaatggctttggtgtcattttaccccctggtttagcccctggaagcgga
gaaagacgtttaggggtgaaggtgaaagcacaagcgcctaaaaaagggcaaaaactgggg
ctacagagtttattaaattataagtgggagttagccgttgatgaggaaaccctctctcct
caagaatttaagcagttattagatcaacaatctcctctagtggaagtcaatggcaaatgg
ttagctttacaacccagtgatgtgaaagcggcgcaaaccttactcaagggtagcgatgcg
gaaatgaatctttctgtggaagatgcggtgagacttaccagtggggaaagtcagacgatg
ggaaaacttccgattgtggattttgaagcctctggtgcgctgcaagaattgattacaaat
ttaagtgggaatcaatctttaacccctgttgcaactcctcaagacttctgcggtgattta
cgtccctatcaagcgcgaggcgttagctggctggcgtttttacaaaaatggggtttaggg
ggatgtttagcggatgatatgggtttaggaaaatgtgtttctcctgagactctgattttt
ctgaatggtaatttatggacggcggaaaaaatttgggaggaatttggtattgaaaccatt
gaggatggggaaggggtttgggcgcaaccttctcaatctttgtgggtgaattcgatcgat
cattctactaacaaaattgttcccgctttaattactcgactgtatcggcagcaggttcag
gaaaagttacgcaaaattcgcttacaagatggggaaaccatcaccattactcaacaacat
aaattattaacttctcaaggatggacgaatcagttacaagtgggagattatgtggcagtt
cctgctaagtattcttgggaaggaaaatcagttgatctggaattagtcgagttgatcgct
tggcaaatggctaaggaactatctttgaactctcaggatcaagtaattccaaacttaatt
atgaatgctgacttagaaggagtgagttactttctgtgtcactattttaaggctaaaggt
tcagtaaatgaggaaacaggaagtatagaatttgcgagtgattctttgatggtaatgaaa
caactctcggtgttactaaaacgttttggtatctggctaaaagtgtctcaacaaccaaat
tgtgtaactgatggtggaaatcgtgagagaacatattatgcgggaagttttgctggcaac
tcagcaagaattttgagtcgttatctgggttgggaaaccgaaaatcaaagcaatcaaagt
tctcaatttgaagaagcatctgtttctactctggtgaaggaaagggaagaacaattattt
tactctcgaattgaatcaattgaggaaatcaattatgagggttgggtttatgattttgaa
atcgccgaacatcataactttatcgctaataatatcatctgtcacaatacaatccagacg
atcgcgctactgttacatcttaaggaaaaagaggaactaaatgcgccaactctcttggtt
tgtccaacttcagttttaggaaattgggaacgagaagtggcaaagttttctcgtaatttt
tccagtctggttcatcatggagagaaacgaaaaaaagggaaaccatttgttaaacaagtt
caaggctatgatttagttattaccagctatgccttagcacaaagagacgcaacgactctg
aaaaatgtgtcatgggaagcggtgattttagatgaagcacaaaacattaaaaatccgcaa
gcgaaacagtcgaaagcggtgcgagaattagaggcaaattttcggattgctttaacggga
actccgttagaaaatcgtttgtcggaattatggtcgattcttgattttttgaaccctggt
tatttaggatcacaacaattttttcaacggcgctttgcgactcccattgagaaatataac
gatcgagattctttacaaacgctacgttctttagttcaaccgtttattttacgacgggta
aaaaccgatcgaacaatcatccaagatttacccgaaaaacaggagatgaatgtttattgt
ggattatcccaagaacaagcgcaattgtatcaggagattgtcgagaaagcattaaaagac
attgaagcggcggaaggaattaaacgtcacggtaagattttaaccctgttggtgaaactg
aaacagttatgcaatcatcctgctttattacagaaggaaaaacagttgattacaccgcaa
cgatcgggtaaattattacgattaactgagatgttggaagagttaaccgcagaaaacgat
cgagctttaatttttactcaatttgcagaatggggaaaacaacttaaagcctatttagaa
caacattttcactgcaatattcccttcctttatggtgcgactcgtaaacaacaacgagaa
gcaatggtggatcaatttcaaaatgatcccgatgcacctccgatttttattctttccatt
aaagcaggtggaacaggattaaacttaactcgcgccaatcatgtgtttcatgtcgatcgt
tggtggaatccagccgtagaaaatcaagccaccgatcgggcatttcgcattggacaaaaa
caaaatgtacaggtgcataaatttatttgtacgggaacattagaagagcgcattaatgag
atgatagagagtaagaaacagttagctgaacaaaccgttgatgcaggtgaagattggtta
acccaattggatactgaacaattacgagatttagtgttgcttgatcgtcaagcggtgatg
gacagtgatcagtaa
DBGET
integrated database retrieval system
