Diprion similis: 124404129
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Entry
124404129 CDS
T08947
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
dsm
Diprion similis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsm03009
]
124404129
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124404129
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
90S particles
Helicases
124404129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
ResIII
HA2_N
nSTAND3
Flavi_DEAD
ATPase
Herpes_ori_bp
AAA_30
Motif
Other DBs
NCBI-GeneID:
124404129
NCBI-ProteinID:
XP_046733977
LinkDB
All DBs
Position
1:14162908..14174426
Genome browser
AA seq
1178 aa
AA seq
DB search
MGKKGYNWKARKVTQIEIDDTITKKIAVDIGSKCENYDQCNALVIPSEKRKTKSKDKKIT
TTRLLSQKRRKELEKVVDRKRKKANRATLLDKLAKVQVSEEELKQYTTLAAVQTRGLKRH
FNEVNKVLKPKPSTSEPEEDQVIVNAIRGAKQTRLSIFGADGKQNTQFDPNVVGFDESSD
NEIESEDETEHPNSTTKPAKETASDKLQQVKDDVIGDKPHTASDKNQDKITMNKVAFNNV
DPVQRKPTVFVMLDRKPEIQAARMKLPILAEEQSIMEMINDNPVVIVAGETGSGKTTQVP
QFLYEAGYAKEKMIGITEPRRVAAISMSKRVAEEMNLSSKEVSFLIRFEGNTTSDTKIKF
MTDGVLLKEIQSDFLLNKYSVIILDEAHERSVYTDILIGLLSRIVPLRNKRKSPLKLIVM
SATLRIEDFTENPKLFKVKPPVIKVESRQFPVTIHFNKRTSQNYVKDALYKAVKIHTQLP
DGGILIFLTGQQEVNTIVRKLRKAFPLRNKKFSIKQQEVKKIQQDEETGSNNSESDDGLD
MDRVIRNARKNKKMLKEVKLPELNLDNYAVMPPDDTEGDLLDTVESRDTDDKEEEEEAEE
EDDEEDLKHLMGLSCTQPMWVLPLYSLLPSHKQARVFDSPPEGCRLCVVSTNVAETSLTI
PNVKYVVDSGRCKTRLYDKVTGVNAFQVCYTSKAAANQRAGRAGRTGPGHCYRLYSSAVF
NDQFEQFSMPEIQRKPVDDLLLQMKVMNIDKVVNFPFPSSPDVLQLKCAEKRLCILGALD
QSKPGKENEYCAKVTPLGYSIAAFPVAPRFGKMLALSQQHDLLQYTVCLVAALSVQEVLI
ESNPMQGTTKNQWTQTRRAWAGSGNSLLLGDAMVLVRAVGAAEYAGSKGTIVKFCEENGL
RYKAVTEIRKLRQQLTNEILLNIPDLDLNVNPRMNPPTDTQAKLLRQILLSGMADQVARK
VSPDEVEEDQDKAKWKYAYRCLEMEDPVFMHSSSVLKKTCPEWVVYQEVYETNKIYMRGI
TAIQPEWLPKFATSLCQLSEPLSDPPPRYDPATGKVMCRVTGTFGRGGWQLPLIEVEYPN
SLEGIKWFARFFLEGQVCPTLKRFASSLLSTPSTMNKTWAKLLPRTEAITKALMANQVSS
KDQLNHIWKTDPKFLLNAYQKWLPESAQNEVQILWPPL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaaggatacaattggaaggcacggaaggtgacacaaattgaaattgacgat
accataaccaaaaagatagcagttgacattggatctaaatgtgagaattatgaccaatgt
aatgctttggttatcccaagcgagaagaggaaaactaaatccaaagataaaaaaattacc
acaactcgtttgctctctcaaaaacgtcgtaaggaattggaaaaagttgttgatcgtaaa
agaaaaaaagccaatagggcaacgcttttggacaagttagctaaagttcaagtgtcagaa
gaagagctcaaacagtacacaacgcttgccgctgtacagacgagaggcttaaagcgccac
ttcaatgaagtgaacaaagtgctcaagccaaaaccatccacgtctgagcctgaagaggat
caagtaattgtgaatgccatcagaggagctaaacaaaccagactttctatttttggtgca
gatggaaaacaaaatacgcagtttgatcctaacgtcgtcggctttgatgaatctagtgat
aatgaaatcgaaagtgaagatgagactgagcatccgaacagcacgactaaacctgccaaa
gaaactgcaagtgataaacttcaacaagtaaaagatgatgttataggagataaaccacat
acagcatcagataaaaaccaagataaaattactatgaataaagttgcatttaacaatgtt
gacccagtgcagcgaaaaccaaccgtttttgtaatgttggatcgtaagccagaaattcag
gctgcacgaatgaagctccctatcttagcggaggagcagtcaatcatggaaatgatcaat
gacaatcctgtggtgattgtagctggtgaaactggaagtggtaaaacgacccaagtgcca
caattcttatatgaagctggctatgctaaagagaaaatgatcggtatcacagagccgaga
agagttgcagcgatttctatgagtaagcgcgtggcagaggaaatgaatctttcatctaaa
gaagtgtcctttcttattagattcgaaggcaatactacttctgatacaaaaattaaattc
atgaccgacggtgtattgctaaaggaaattcaaagtgactttcttctcaacaagtattcg
gttattattttggacgaagcgcacgaacgaagcgtctatacagatatcttgatcggttta
ttgtcgcgaatcgttcctttgcgaaataaaagaaaatctccattgaaattaattgtaatg
tcagcaacattgcgcatcgaagacttcacagaaaatcctaaactcttcaaagtcaaacca
ccagtcatcaaagttgaatcaaggcagtttcccgttactatacatttcaataaaaggact
agtcaaaattacgtgaaggatgcgttgtacaaggcagtcaagattcatactcagctgccg
gatggcggtattcttatattcttaacagggcaacaggaagtaaacacaatagtgcgtaaa
ctacgtaaagcatttcctttgagaaacaaaaaattctcgattaaacaacaagaagtaaaa
aaaatacaacaagacgaagaaactggcagcaacaacagcgaatcagacgatggtttggat
atggatcgagtgataagaaatgccaggaaaaataaaaaaatgctgaaggaagtcaaactt
cctgaacttaatcttgataattatgctgtaatgcctccagatgatacagagggcgatcta
ctcgatacagtagaaagtcgggatacagacgacaaagaagaagaagaagaagcagaagaa
gaagacgatgaagaagatttaaagcatctcatggggctgtcttgcacacagccaatgtgg
gtgttaccactgtattcacttcttccgagtcacaaacaagcaagggtatttgattcacca
cctgaaggctgtcgattatgcgttgtatcgacaaatgttgcagaaacttccctcacaatt
ccaaatgtaaaatacgttgtggatagcggtcgctgcaagaccagattatatgacaaagtg
acaggtgttaatgcattccaagtatgttacactagcaaagctgctgctaaccagagggcc
ggacgagcaggtagaactggaccgggacattgttacagattatactcatcggcagttttc
aatgaccagtttgagcagttttctatgcctgaaatacagaggaaaccggtagatgactta
ttgttgcaaatgaaagtcatgaatattgataaagtcgtcaattttccattcccatcgtca
ccagatgtgttgcaattgaaatgtgctgagaaacgtctctgcatcctcggagctctagat
caatccaaacctggcaaagagaacgaatattgcgccaaagtaacaccacttggctatagc
atagcagcatttccagtggcacctcgatttggtaaaatgctggcattatcgcagcagcac
gatctgttacaatacacagtttgcttagtggctgctttgtctgtgcaggaagtgttgatt
gaatctaatccgatgcaaggtactactaagaatcagtggactcaaacgcgtcgagcttgg
gcaggatctgggaacagtttgcttctgggggatgcaatggtcttagttcgagccgttggt
gctgcagaatatgctggatcaaaagggacgatagtcaagttttgtgaggaaaatggacta
cgatacaaggctgtgacagaaattagaaaacttaggcaacaactgaccaatgaaatactc
ctaaacataccggatttggatttgaatgtcaatccaagaatgaatcctccaacggataca
caagcaaaactgcttaggcaaattctactctctggtatggcagatcaagtcgcacgcaaa
gtttctccagatgaagttgaggaagatcaggacaaagcaaaatggaaatatgcatacaga
tgtttggaaatggaagatccagtattcatgcactcttcgtctgttctaaaaaaaacttgc
cctgaatgggtagtttaccaggaggtttatgaaactaataaaatatatatgcgaggcatc
actgccattcagccagagtggttaccaaaattcgccacatccttatgtcagctgagcgaa
cctctgagtgacccacctcctaggtacgatccggcaacgggaaaggtgatgtgccgtgta
acagggacctttggtcgaggtggatggcagctaccgctgattgaagtagagtatccaaat
tccttggaaggcatcaagtggtttgcccggttttttttggaaggtcaagtttgcccgaca
ttgaaacgattcgcttcctcactactttctacacctagcacaatgaacaagacgtgggca
aaattactgccgcgaactgaggcgatcacaaaagcgctaatggctaatcaagtttcatca
aaagatcaactgaatcacatttggaaaacggatccaaagtttcttttgaatgcataccaa
aagtggttaccggaatcggcgcagaatgaggttcaaatactttggccaccattatag
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