Diprion similis: 124404571
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Entry
124404571 CDS
T08947
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124404571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124404571
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124404571
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124404571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
CysS_C
Spectrin_Anc-1
PulA_N1
Motif
Other DBs
NCBI-GeneID:
124404571
NCBI-ProteinID:
XP_046734767
LinkDB
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Position
3:complement(1953854..1960476)
Genome browser
AA seq
688 aa
AA seq
DB search
MHNIHIAAGVKMREIKGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEI
KKLQRLRDQIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQ
KLDPAQKEREEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKL
EKHRYHIRKLETLLRMLDNMSVEVDTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLD
EVELSGVGIPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDTDKK
TKPVKPTAVRPLLNSQGSISTTGSTTVIKMSLLSSSTPSKPIPMTSSHSSPSATINHIAT
SNAGNFATVAASHINSQVIHSTSSKTSSHGSENGLLSSSSTSSVASNVPPTIMQQHNNPP
PLQPSHILLNQQSQNHNSEAEMTTPIPSSSSPPSPVSSRSSPLPANSCSPVPSATNGLIS
KIPDGMSSLKSIAQQVIVRAGLEIPPSEPTRNLFDTTKVSNATSEAHIPPLLGVAPLGPV
PLQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNLCKTPPYYQQVQLPHSDTVEFFQR
LSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYI
YFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcataatatacacatagcagcaggagttaagatgagagaaataaaaggtgaaatagac
aggtgccttaaaaaagtgacggagggcgtagagacgtttgaggacatttggcaaaaagtc
cacaatgccactaacagcaaccagaaggagaagtacgaagctgatctcaagaaggagatc
aaaaagcttcaaaggttacgcgaccaaatcaagagctggattgcatctggagaaattaag
gacaaaagtaccctccttgattatcggaagctaatcgaaactcaaatggaaaggttcaaa
gttgtagaaagggaaacgaagactaaggcttattctaaggaaggcctaggagctgcccaa
aaacttgacccggcgcaaaaggaaagagaagaagtcagtaactggctagctaattcgata
gatgcgctcaatttgcagctggatacatttgagtctgaaatagagtcattgcttgccgga
aagaaaaaaaggctagacaaagataagcaggatagaatggatgagctcaaagcaaagctt
gaaaaacaccgataccacattcgcaagctggagacgttgttgcgcatgttggataatatg
tctgtcgaggttgacacgatcaagaggataaaggatgatgtcgaatattatattgaatcc
tcccaagagccagactttgaggagaatgagtacatttacgatgacattattggactggac
gaagtcgagttatctggtgttggtataccatcgtcagcaacgacggatagtaacaacagc
aacgaaacgggaggcactccaacgtccactaattcaggaacttcgcccataccgtcacct
cctctaagttccaccatgcacaatcattcgagtgatagttctacagatacggataagaaa
acaaagcctgtgaaaccgacggcagtgagacctttacttaattcccaaggaagtatttca
acgacaggaagcactactgtaataaagatgagtttgttgtcgagcagtacgccgagcaaa
cccattcccatgacatctagccatagctcgcctagcgcaacaattaaccatattgcaacg
tcgaacgctggaaactttgcaactgttgctgcgtcgcacataaactctcaagtcatccat
tctacctctagtaaaacatcatctcatggaagtgaaaacgggctgttatcatcatcatca
acatcaagcgtagcgtcgaacgtacctccaacaattatgcagcagcacaataatccaccg
ccacttcagccgtctcatatactgctaaatcaacagagtcagaatcacaacagcgaagcg
gaaatgacgacgccgattccctcgtcgtcgtctccgccttcgcctgtgagcagtcgatcc
tcgccattgcctgcaaattcctgttcaccggtaccatctgccaccaacggtctcatctct
aaaattcccgacggcatgtcttcgctaaaatccattgcccaacaagttattgtcagagca
ggtcttgagatacctccatcggagccaactaggaacctctttgacactacgaaggtgtca
aatgctacttcggaagcacacattccgccgctacttggggtggcgccgctgggaccggtg
cctctccagaaagagcaccaacttcaattccaaatgatggaagcagcttactatcacatg
cctcatccctcagactctgaacgactcagatcgtatttgccccgcaatttgtgcaaaacg
ccgccctactatcaacaagttcagcttccacattctgatacagtggaatttttccagcga
ctatcaacggagacgctatttttcatattttactatatggaaggatccaagggacagtac
ttggcagctaaagctcttaagaaacaaagctggaggttccatacgaaatacatgatgtgg
ttccaaagacacgaagagcctaaagttatcaacgaggagtacgaacagggaacgtacata
tacttcgattatgaaaaatgggggcaacgcaaaaaagaaggcttcacttttgagtacaag
tacttagaggacagggaccttaactaa
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