Diprion similis: 124404628
Help
Entry
124404628 CDS
T08947
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dsm
Diprion similis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dsm01009
]
124404628
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124404628
04131 Membrane trafficking [BR:
dsm04131
]
124404628
03036 Chromosome and associated proteins [BR:
dsm03036
]
124404628
Enzymes [BR:
dsm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124404628
Protein phosphatases and associated proteins [BR:
dsm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124404628
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124404628
Membrane trafficking [BR:
dsm04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124404628
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124404628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
NuDC
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
124404628
NCBI-ProteinID:
XP_046734913
LinkDB
All DBs
Position
3:complement(15065471..15073953)
Genome browser
AA seq
1205 aa
AA seq
DB search
MTDANAGGNNLFTAARQLAESEIHLIQVIEGTRKSNRKVAQSNMTTTVKNTGGKKSAKSL
SARPSAALVAAKQVAAERKLVHSKKSGNTILRDIYQKAMDAQTITRGETGLVWDWSMEEH
RCLWDSTYPECPERFTRIMERCKDLGLISRCRAIEVRDATHEEILLKHTQQHIDMLKKTA
QCKDEETLESLASKYDSIYIHPSTYRLSLLAVGSTINLLESICRKKVQNGMAIIRPPGHH
AMKAEYCGYCYFNNVAIAAQKMLDDNLASRILIVDWDVHHGQATQQMFYNDPRVVYFSIH
RYEHAEFWPNLRESNYDYVGEKKGTGYNFNVPLNKTGMTNADYIAIFQQLLLPMAYEFQP
DLVIVSAGYDAALGCPEFCPDIVIVSAGFDSAIGDEKGEMNVTPACYAHLLHPLMGLAGG
KVAVVLEGGYCLKSLAEGAALTLRALLGDPCPMLHPLEKPSHSIQETILNVIYAHKTYWS
CYQYQDTYSLHVPANSIEEKNNRHLPNIVFKSPEPKPETYETRNCYPVPSAELAAEFDTK
LNLLIEFTNLNKAPNKVCIVYDDRMLCHTNIVDNTHPEKPERISGIFAKHEEYGFLKRCH
LLQGRLATEEELSLAHSKTYIETMKKTASTKLRDLNKQASDLKSVYLHTETWKSACVSTG
CLLQVVDSVLTGKSQSGLAIVRPPGHHAERDMACGFCIFNNAAVAARYAVKNYNLKRVLI
VDWDVHHGNGTQSILEADPQILYISIHRYDNAGFFPNSKRANYTVTGTGPGEGYNVNIPW
NKKGMGDPEYIASFQQVVMPIAYQFNPELILVSAGFDACIGDPLGGCNVSPEAYGHFTHW
LSSLANGRVILSLEGGYNVSSISYASLMCTKALLGDPLAMIDSQQPPSSSAVNSINNVLR
THKQYWPNLMFQKSLPKENVLPKLKSATSRNKSEKRRGASRKTSESKIVFEDIESEKLEI
SLPIDKFSLNTVTDEEINKLQNEIENLKIKNFASDSPDLEASGRRDIHSGIPKQHGEINE
ANYGRTCVNPNQNQGSSGRGSDRRNDEGGQSGSSEGNNDLSGAAGAAGGSSLMQYLSENM
QALVDGEMFAIVPLRDCPHLPTVEEVPAGGIDVRAPCQECNSTAENWICLQCYTVHCARS
INQHAVTHGEETQHPMTLSFSDLSVWCYGCEAYIDNPRLYAARNAAHRSKFNQDLPWTYN
NLEIA
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgcaaatgcaggtgggaacaatctgtttactgccgctagacaattggcagag
agtgaaatacatctgatccaggtgatagaagggaccagaaaaagtaacagaaaagttgca
caaagcaacatgaccactacagtgaaaaatactggcggtaaaaaatcagccaaatcgttg
agcgccaggccttcggcggcgttggtggcagcgaagcaagttgcagcagagcgaaagctc
gtccattcgaaaaaatctggaaacactatcctcagagacatttaccagaaagccatggat
gcccagacaattacgcgtggcgaaacgggtcttgtttgggattggtcgatggaagaacac
cggtgtctttgggattcgacatatccggaatgccctgagaggttcacaaggattatggaa
agatgcaaagacttgggtttgatcagtcgctgcagggctatagaagtgcgcgacgccact
cacgaagaaatattactcaaacacacacagcagcatattgatatgctgaaaaaaactgcg
cagtgcaaagatgaggagactcttgaatcattggcttcaaaatatgactctatttacatc
catccttcaacttatagattatcgctgctggctgttggctcgacgataaatttgctggaa
agtatatgtagaaaaaaagtacaaaacgggatggctataatcagacccccaggtcatcac
gcaatgaaggccgaatattgtggctactgttacttcaacaacgtggctattgctgcacag
aaaatgcttgatgataatttggcaagcagaatattaattgttgactgggacgttcaccac
ggacaagcgactcaacaaatgttttacaatgatccgagagtcgtttacttttccatccat
cgatatgaacatgccgagttttggccgaatcttagggaatctaattacgactatgtcgga
gagaaaaaagggacaggttacaatttcaacgttcccttgaacaaaaccggaatgacaaat
gctgactatatcgccatatttcaacagctccttcttccaatggcttatgagtttcaaccg
gaccttgttattgtctcagctggttacgacgcagcgctcggctgccctgagttttgtcct
gacattgtcattgtgtctgccggattcgattcagcaattggcgatgagaagggtgagatg
aacgtgacgccagcttgttacgctcatcttttgcatccgttgatgggtttagctggtggt
aaagttgcggttgtgttggagggtggctattgcctaaaatctctagcagaaggagctgcg
ttaactttaagagcattactcggagatccttgcccaatgttgcatccgctagaaaaacca
tctcacagcatacaggaaactattctgaatgtcatatatgcccacaaaacttattggagt
tgttaccaatatcaagacacgtacagcttacatgttccagcaaatagtatcgaggaaaag
aacaacagacacctgcccaacattgttttcaaaagtccagagcctaaaccagagacttac
gagactcgaaactgttatccagttccgagtgcagaattagctgcagagttcgacacgaag
ttaaatttattgatcgaatttacaaatttgaacaaagcgccaaacaaagtctgcatcgtg
tatgacgacagaatgctctgtcatacaaatattgtggataatacccacccagaaaagccc
gagagaatatcaggaatttttgccaaacatgaagaatatggatttctcaaacgatgccat
ttgctccaaggaagactggcaacggaggaagagctgtcgctagcccattcgaagacgtat
attgagacgatgaagaaaaccgcatcaacaaagctgagagatctaaataagcaggcgtct
gatttaaagtcggtctaccttcacaccgagacatggaagagcgcctgtgtttctaccgga
tgtttgcttcaagttgtggatagcgttttgactgggaagagccagtcaggcttggcaatt
gtcaggccgccggggcatcacgcggaacgagatatggcctgtggattctgtatatttaac
aacgcagctgtcgctgcaagatatgctgttaaaaattataacttgaagagggtgttgata
gtcgattgggacgttcaccacggcaatggaacgcagagtattttggaagcagatcctcag
atcctgtatatatctattcatcgttacgacaacgccggtttcttcccgaattcgaagcgg
gcgaattacacagtgactggaactggtccgggagaaggatataatgtgaacataccttgg
aacaaaaaaggaatgggagacccagagtacatagcgagctttcaacaagtcgtcatgccg
attgcgtaccaattcaatccggagctgatcctggtttccgccggtttcgatgcctgcatc
ggagaccctttgggaggatgcaacgtctcaccggaagcttatggccatttcactcactgg
ctaagttctttggcaaacggtcgagtcattctatcgctcgaaggtggctacaacgtcagt
tcgatttcctacgcatctttaatgtgtacgaaagctctgcttggagatccattggcgatg
attgattcccaacaaccgccatcttcaagcgctgtaaattcgatcaacaacgtgttacga
acgcacaagcaatactggccaaatttaatgttccaaaaatctttgccgaaagaaaatgtc
ctcccgaaactgaaatctgccacgtctcgtaataaatcagagaaacgtcgcggcgcttcc
agaaaaacatctgagtctaagatcgtgtttgaagatatcgaatccgaaaaattggagatc
tctttgccaatcgataaattcagcctgaacacagtcacggatgaggaaataaacaagttg
cagaatgagattgaaaatttaaagataaaaaattttgcaagcgattctcccgatcttgaa
gcttcaggaaggcgtgacattcattcaggaatcccgaaacagcatggcgaaatcaatgaa
gcaaattacggcagaacctgcgtcaatcctaatcaaaatcaaggatcttctgggagagga
tctgatagacgaaatgacgaaggtggtcagagtggaagctcagaaggaaataatgattta
agcggtgctgctggcgcagcaggagggagtagcctgatgcagtatctttcggaaaacatg
caggcattggtagatggtgaaatgtttgcgatcgtcccgctacgagattgtcctcactta
ccgactgttgaagaagtgccagcgggtggaatcgacgttcgagctccttgccaagagtgc
aatagcactgcagagaactggatctgcctacagtgttacacggtacactgtgcaagaagt
atcaatcagcatgcagttactcacggtgaggagacgcagcatccaatgacgctgagcttt
agcgatttgtccgtatggtgttacggttgcgaagcatacatcgacaaccctcgactttac
gcagcgagaaacgcggcccatcgaagtaaattcaatcaagacttaccttggacttataac
aatttggaaatagcttaa
DBGET
integrated database retrieval system
