Diprion similis: 124404842
Help
Entry
124404842 CDS
T08947
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
dsm
Diprion similis
Pathway
dsm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124404842
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dsm00536
]
124404842
Glycosaminoglycan binding proteins [BR:
dsm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124404842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
CFC
PhoD
Motif
Other DBs
NCBI-GeneID:
124404842
NCBI-ProteinID:
XP_046735243
LinkDB
All DBs
Position
1:complement(985681..998424)
Genome browser
AA seq
1632 aa
AA seq
DB search
MTGRSGRTRLLLLGIAAFLVLLESTQTQAARTKIRHHRIRPIQAQEPDNRRNADYDTEYE
PEYYDNYEDYEEQIKNETQPSLSPVPEENRGPAVRPTSGPTSQPSAIFGENLVGPRPPGG
PGGPGGPGRPGGEVITPSPAVVPDNPRTDTVPDSTEPPTGGDDNVGCIFDGVSHGADDQW
NPDRCTSCRCIQGKAECSQLIPCLSGGNCDGVVCAQLSCETEQYIPLGQCCPICADPGPI
SGGTAPIQPTLPSGILPGESNRVSSIAVSGPRGEAGRPGDSGRQGDSGFPGTPGTPGIPG
PPGPPGPAPDVSLYYQQLALSQAGQDKGPTGAAAPLYGGPDAYAYMQAQVGPVGPRGPPG
PSGNPGPQGFQGIRGEPGEPGPVGPSGQPGPRGLPGLPGKDGNVGEDGESGPQGSPGPMG
PRGLPGMPGLPGIKGHRGFPGLDGAKGEQGHSGEKGSSGGPGPMGPMGMMGPAGPRGERG
REGSPGPPGMRGIDGISGPPGLPGVPGKSGPPGFPGSPGNKGDQGAQGPKGSQGLQGPRG
ESGRPGQPGESGPSGPQGKDGYPGEKGSTGAPGMLGQPGFPGVRGQPGLAGNPGTPGAKG
MPGLPGERGYKGEIGAKGDSGAPGPRGMPGPTGSEGKRGKRGMRGSIGATGPPGERGMPG
IRGLPGPDGAVGPKGQTGDRGPVGGSGPKGATGDPGRPGLQGLQGPRGLMGRPGASGKPG
NAGERGIQGADGKPGDPGPPGLQGLPGPLGLPGDKGYPGEPGKDGEPGAQGPPGPRGDSG
KDGPSGVQGPPGPPGSDGGRGPPGPAGPRGFQGMPGGSGNPGIPGKDGEPGLQGPQGLPG
PFGNRGERGFPGERGPVGSPGAPGPRGESGSQGNDGFPGVPGPKGDKGHSGMPGLIGLPG
LRGAPGMPGDKGERGSYGPVGPEGPAGRMGERGPQGPMGQPGPPGEPAERGDTGPQGAPG
EPGAPGNIGERGPQGPQGLQGFPGPHGLSGLPGVKGERGYPGLKGDQGSPGATGNPGESG
LPGLVGLTGAKGARGEAGARGEPGLMGPPGLPGPVGAAGQPGAPGTPGLAGLPGVKGSLG
DVGRPGNPGPMGNPGMPGVEGMKGESGSEGPPGLSGPPGPQGPAGDRGMPGLPGPAGAVG
LRGMRGAPGETGIPGKPGPEGPLGPSGMSGPAGPPGPAGDAGPEGSPGKQGQPGIAGRPG
DKGPPGMAGPSGNPGPSGLPGPPGQSGPQGPAGERGPRGEAGPQGVEGQRGAPGKPGPVG
PEGMKGDRGEPGPTGAKGHRGLIGLQGLQGTPGFHGEKGMVGPPGPPGKNGEIGVRGLPG
RDGSQGPQGMPGNPGPRGPPGDEGRHGATGPPGPPGPPGPPGELGLGYDAASLAALLNAG
QGQSKGPDPLSGDEPPRIFGKDITDAERKELIMKAYEQLKASFQKFVKPDGQKQSPAKTC
RDLFVAYPEKSSGEYWIDPNEGDQRDAILVYCDVESRKTCLLPKPPQSPEITYIGNEQEV
WLSEMENGMQITYKADTNQISFMQLLSSHAEQNVTYHCKNTVGYFDSQRRTYRRGLKLLA
WNDVELTPRGNQRLRYDMILDECRERSHQWGKTVISYRTDKPVRLPILDVGLRDVGKQDQ
SFSVEIGPVCFR
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggagaagcggccgaacccggctccttcttctggggattgccgcgttcctggtt
ctcctggaaagcacccaaacccaggcggcgaggacaaagatcaggcaccatcgcattaga
ccgatccaggctcaagagcccgacaatagacgtaacgccgactacgacaccgagtatgaa
cctgagtattacgacaactacgaggactatgaagagcagatcaagaacgaaacacagccg
tctcttagtcctgtaccagaagaaaaccgtggcccggcagtaagaccaacgtctggacca
acatcacagccctcggcgatatttggtgaaaatctggtcggcccgagaccgcctggagga
cctggaggccccggaggacccggaagacccggaggtgaagtgataacaccatcccctgcc
gtagtgcctgataatccacggaccgatacagttccggactcgacagaaccaccaaccgga
ggtgatgacaacgttggctgcatattcgatggggtgtcccatggagccgacgaccaatgg
aacccagaccgttgcacatcgtgccgctgtattcagggaaaagctgaatgttcccaattg
attccatgtctatcaggcggaaattgcgatggcgtggtctgtgcccaattatcctgtgag
acagaacagtacattcctctgggccagtgctgtcccatatgcgcagaccctggaccaata
tcaggaggaaccgcgcctatccaaccaactttgccgtcaggaattctcccgggagagagc
aatcgggtcagctcaattgcagtctccggaccaaggggagaggcgggacgccccggagac
agtggccgtcaaggcgactctggatttccgggaacacccggcaccccagggattccgggg
ccgcctggacccccaggacctgcacctgacgtgtccctgtactatcaacaactcgccttg
tcgcaagctggacaagacaaaggtcctaccggagctgctgcaccattgtacggtggtcct
gacgcgtatgcttatatgcaggctcaggttggtcccgttggaccacggggacctccagga
cctagcggcaaccctggtcctcagggctttcaaggaatacgaggcgagcccggagaacct
ggacccgtgggaccatccggtcagcccggaccacgaggattacccggacttcccggaaag
gatggtaacgttggcgaggatggagagtcagggcctcagggttctccgggtcctatgggt
ccgagaggtctacctggaatgcctggtcttcctggcattaaagggcatcgaggattccct
ggtttggatggagcgaagggagagcagggtcattcgggagaaaaaggatcctccggtggg
ccgggaccaatgggtccaatggggatgatgggtccagctggtccgcgcggtgagcgagga
cgtgaagggtctccaggacccccggggatgcgaggaatcgatggcatttcagggccaccg
ggattgcctggtgtacccggaaaatcaggaccccccggcttcccaggcagtcctggtaac
aaaggggaccaaggcgctcaaggtcctaagggtagccagggtctccagggaccaagaggt
gaatctggacgtcctgggcaacctggagaatctggaccatctgggccacaaggaaaagat
ggttacccgggcgaaaaagggagtaccggtgcaccagggatgctagggcaacctggtttt
cccggagttcggggccagccagggttagccgggaatccgggaactccgggagcgaaagga
atgccgggcttgccaggagaaagaggatacaagggtgaaattggggctaaaggtgactcc
ggagctcctggtcctcgtggtatgccaggaccaaccggtagcgagggtaaaagaggaaag
cgtggaatgcgaggttccatcggggccaccgggcctccgggtgaacgtggaatgcccggt
attcgcggccttcctggtcccgacggtgctgtagggcccaaaggacaaactggagatcgt
ggacccgttggaggaagtggtccaaagggtgcgacgggagatccagggagaccaggtctg
cagggcttgcagggtcctcgagggttaatgggacgtcctggtgcttcagggaaacctggg
aatgcgggagagcgaggaattcagggtgcagacggaaagcccggcgatccgggaccaccg
ggattacagggattaccgggaccactgggacttcctggagacaaaggatacccgggagaa
cctggaaaagatggtgagccaggtgcacaaggtccaccggggcccagaggtgactctggt
aaggacggaccatcgggtgtacaaggtcctccaggtccgcccggaagcgacggaggacga
ggaccaccaggtcccgcaggtcccagaggattccagggaatgcccggaggcagtggtaac
ccgggaattccaggcaaggacggagaaccaggacttcagggtccacagggacttccaggt
cccttcggaaatcgaggagaacgtggttttcccggagagcgtggtccagtcgggtccccc
ggagcaccgggaccaaggggagaatcaggatctcagggcaatgacggatttccgggtgta
ccagggccgaagggggataaaggacactcaggaatgcccgggctaataggattgcctgga
cttcggggcgctccaggaatgcccggtgataaaggagaaagaggatcgtatgggcccgtg
ggtcccgaagggccagcaggaagaatgggtgagcgtggaccgcaaggaccaatgggacag
ccgggaccacccggcgaaccagctgaacgtggagacaccggacctcagggagctcccggt
gaacctggcgctcctggtaacattggagagagaggacctcaaggtcctcaaggccttcag
ggcttcccgggaccgcatggtctttctgggttgcctggtgtaaagggagagcgtgggtat
ccagggttgaagggagaccaagggagccctggagcgacaggaaatcctggggaatcggga
ctcccaggtttggtgggactgactggagccaaaggagctcggggcgaagctggtgccagg
ggtgagcccgggttgatgggtcctccaggtttgccaggaccagttggagctgcgggacaa
ccaggagctccaggtactccgggtctcgctgggttaccaggggtgaagggaagcttggga
gacgttggtcgaccaggcaaccctgggccaatgggtaaccccggaatgccgggagtggag
ggtatgaaaggagaaagtggatcggaggggccacctggtctgagtggtccaccagggccg
caaggaccagcgggagatcgaggaatgcccggactaccaggacccgcgggagccgtcggt
ctcagagggatgcgaggtgctccaggtgaaactggaatacccggaaaaccaggacccgag
gggccattaggacctagcggaatgtctgggcctgctggacctccagggcctgccggtgat
gccggcccagaaggttctccgggaaaacaaggacaaccgggaatcgccggaaggcctgga
gacaagggaccacctggtatggctggaccgtccggaaatcctggaccgagtggattgccg
ggaccgccaggacaatctggaccacaaggaccggccggagaaagaggcccgagaggagaa
gccggacctcagggtgtcgaaggacaacggggtgcgccaggtaagccggggcctgttggt
cctgagggaatgaagggagatcgcggagagcctggaccaaccggtgcgaagggacatcgg
gggttaatcgggcttcaaggactgcagggaacaccgggtttccatggggaaaagggaatg
gtcggacctcctggtcctcccgggaagaacggagagattggcgtgcggggtctcccaggt
agagacggaagtcaagggcctcaaggtatgcctggaaacccgggaccaaggggaccgccc
ggagatgaaggacgacacggagcgactggaccaccgggaccaccaggacccccgggaccc
ccaggagaacttggtctcggctacgacgcggcatctttggcagctcttctgaatgccggt
cagggccagagtaagggtcccgaccctctgagcggtgatgaaccaccaagaatattcggc
aaggacatcaccgatgcagagcgcaaggaacttattatgaaagcatacgagcagctcaag
gcctccttccagaagttcgtcaaacccgatgggcagaaacaatcgccggcaaaaacttgt
agggatcttttcgtcgcatatccggaaaagtcgagtggcgaatattggatagacccgaac
gaaggagaccagcgtgatgcaatcttggtttactgcgatgttgaaagtcggaagacctgc
ctgttgccaaaacctcctcaatccccggaaatcacgtacatcggtaacgaacaggaagtt
tggctgagtgagatggaaaacggaatgcagataacttataaggcggataccaaccagata
agttttatgcaactactgtccagccatgctgaacaaaacgttacttaccactgcaaaaat
actgtcggctacttcgattcccaaagacgaacatacaggcgggggttgaagctacttgcg
tggaacgacgtcgagcttacaccccgtggtaaccagcggctgcggtacgacatgatacta
gacgagtgtcgggaacgttcccaccaatggggcaagacggtgatcagttatcgaacggac
aaaccagttcgtttgccgatactagacgttggcttgagggacgttggtaagcaggatcag
agcttttcggtggaaattggtcccgtttgcttcagataa
DBGET
integrated database retrieval system
