Diprion similis: 124404894
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Entry
124404894 CDS
T08947
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dsm
Diprion similis
Pathway
dsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124404894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124404894
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124404894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
MMR_HSR1
GTP_EFTU_D2
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
124404894
NCBI-ProteinID:
XP_046735335
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All DBs
Position
3:2308670..2313977
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AA seq
693 aa
AA seq
DB search
MSRHRNVRSEFVNYSDEYEGYDDVYGHSVEDDYCVSPSVSILAEQFLFDRNKQHNISSYI
TEDDIAEEDETQEETPLPSSYKKPELSVLDATKLESCIEVIKNVVGDSIPESTLTEIILK
HNLNSEAALDAILATTSSNNASEKPVLNQNSEDLLQGKKLAAKPAVPVLLSSPAVKVIPS
ATRSVVKGFDISGTDGDFLNTTVESPRSQSPFSGQTSPDIRRKDIKTVSSKSNTPRCQSP
AAEQDNKSKSNSKKLDAISLFKNVRGDIKEQLHLVVVGHVDAGKSTLLGRLLCDLGQVSS
KLLHKFQTESKKIGKQSFAYAWVLDETGEERERGITMDVGHSKFETATKTITLLDAPGHK
DFIPNMIMGATQADVALLVVDATRGEFETGFDSGGQTREHALLLRSLGVSQLAVVINKLD
TVDWSKDRYDEIVEKMKVFLKQAGFRDAIPFVPCSGLSGENLVSKSKEEGLIKWYKGPTL
TEVIDQFKCPERPVDQPFRFSVNDIYKGTGSGFCVSGHVETGIISTSDKVLVLPHNEVAS
VRGLQIDEMPVTNGFAGDHLVFTLTGIDQQIIAVGDLLCDPQHPVPVTTRFEAHIVIFAV
AMPITRGLPVVMHHQSLVEPVVIKKLVAQLHKSSGEVIKKKPRCLPKNSSAIVEIETQRP
VCMELFRDVKQLGRVMLRVGGSTIAAGLVTKIY
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacaggaacgtccgttctgaattcgtgaattactctgatgagtatgaggga
tatgacgatgtttatgggcattccgttgaagatgattactgtgtttctccaagcgtttca
attttagcggaacaattcttatttgaccgaaacaagcagcataacatttcttcatacatt
acggaagatgacatagcggaggaagatgaaactcaagaggaaacgccattgccctcgagc
tataaaaaaccggaactctcagttcttgatgcaacaaaattagaatcctgcatcgaagtt
ataaaaaatgttgtcggcgactcgatccctgaatctacactcacggaaattattctcaag
cataaccttaactcagaagctgcacttgacgctatacttgctactacatcgtcaaacaat
gcatctgaaaagccggtccttaatcaaaatagtgaggatcttcttcaaggtaaaaaacta
gctgctaaaccagctgtacctgtgctactatcctcccccgctgtaaaagtaattccatca
gcgacacggtcggtcgtcaaaggctttgatattagtggaacagacggagatttccttaac
acaacagttgagagtccgagatctcaaagtccattctctgggcaaacctcacctgatatt
cgaagaaaggacatcaaaacagtttcatcaaaatcaaataccccgagatgtcagtctcca
gcagcagaacaagataataaatcgaaatcaaatagtaaaaaattggatgcaatcagcctg
tttaagaatgtccgtggagacataaaggaacagttgcacttggtagtcgtcggccatgtt
gatgctggaaagagcacattactgggtaggcttctctgcgatctaggacaggtgtcttca
aaattattacacaaatttcaaactgaaagcaagaagattggcaagcaatcgtttgcgtac
gcatgggtgctcgatgaaactggtgaagaaagggaacgtggtatcacaatggacgttggt
cactcgaaatttgaaaccgctactaaaactattacacttttggacgccccaggtcacaaa
gatttcattccaaacatgattatgggtgcgacgcaggccgatgttgcactcctagttgtt
gatgccacgaggggagaatttgaaactggttttgacagcggtggacaaacgagagaacat
gctttgcttttacgctctcttggtgtctctcagctggcagtagtaataaacaaattggat
accgttgactggtccaaggatagatacgatgaaatagttgaaaagatgaaagttttcctc
aagcaggctggttttcgagatgccataccattcgtaccatgtagcggtttgtccggggag
aatttagtctccaagtccaaggaagaaggtctcattaaatggtacaaaggacccaccttg
accgaagttatcgatcaattcaaatgtccggaacggccagttgaccaaccattcaggttt
tccgtaaatgacatttacaagggaactggctcaggattttgtgtgtcaggacatgttgag
actgggataatttccaccagtgataaggtgttagtactaccccacaacgaagtcgcttct
gtccgaggcttacagatagatgagatgcctgtaacaaatgggtttgccggtgaccatctt
gtcttcacattgacggggatagatcagcagattatagccgttggtgacttgttatgtgat
ccccagcacccggtcccagttacgactcgatttgaagcgcacatagtaatatttgctgta
gcgatgccgattactcgtggccttccagtagtaatgcatcaccagtctctcgtggagcca
gtggtgataaagaaactcgttgctcagctccacaaaagttctggggaagtgataaaaaaa
aaacctcgatgtctgcctaaaaattctagcgccatagttgaaatagaaactcagcgacca
gtttgcatggaattattcagagatgttaaacaacttggcagagttatgctgcgtgtgggt
ggttctactatagctgctggtttggttactaagatatactga
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