Diprion similis: 124405528
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Entry
124405528 CDS
T08947
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124405528
09123 Folding, sorting and degradation
03018 RNA degradation
124405528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124405528
03041 Spliceosome [BR:
dsm03041
]
124405528
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124405528
mRNA degradation factors
5'-3' decay
Lsm complex
124405528
Spliceosome [BR:
dsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124405528
Complex C
U2 snRNP components
124405528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
124405528
NCBI-ProteinID:
XP_046736447
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All DBs
Position
4:20783214..20784577
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttattctactcgtttttcaaatctttggtcgggaaagacgtggtagtggagttgaaa
aatgacctgagtatttgcggtaccttacactctgtggaccagtatctgaacatcaagctc
acagacatcagtgtgacagatccagataaatatcctcacatgttgtcagtgaagaactgt
ttcattcgtggttctgtagtaaggtacgttcaacttcctggagatgaggttgatacccaa
cttttgcaagatgctgcacggaaagaggcagctgtacaaacccgataa
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