Diprion similis: 124405703
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Entry
124405703 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124405703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124405703
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124405703
Spliceosome [BR:
dsm03041
]
Complex C
Other components
Step II factors
124405703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
AAA_22
DEAD
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
124405703
NCBI-ProteinID:
XP_046736780
LinkDB
All DBs
Position
4:21706746..21731415
Genome browser
AA seq
1219 aa
AA seq
DB search
MDMDEVAKLEHLSLVSKICTELENHLGLNDKDLAEFIVDLAEKNNSLESFKKVLVENGAE
FSDSFMANLLRIIQHMKPSKQLNDKSHNANHRQDDLSLKFPGLAIPNEHKNLQPIKEEKD
EDVVNDTMAALEALAPSGSKTQPDSKKEQEGPVVDAANDKKDKDRDRRKNRSKDRKRDRS
TSRNHRDRKHRSRSRDRSRSRDRNRDRRRRASRDRKRSRSRGARSRSRNRRSRSRDRKIS
KRNKRHETERSRSRSVEELAVDPEVGKIYTGKVANIVQFGCFVQLEGLKRRWEGLVHISQ
LRREGRVASASDIVSRGQKVLVKVLSVAAQKVSLSMKDVDQETGRDLNPVVSIAKADEDE
KHLRNPDRPTSLLELQGHLDEDETYSRKRVQRLSSPEKWEIKQMMSAACIDRSELPEFDI
ETGILPREDDEEEDVEIELVEEEPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSAL
AKERREQKMLQREQEMDSIPAGLNKNWIDPLPDAESRTLAANMRGIGLQTQDLPEWKKHV
IGGKKSSFGKKTNLTLLEQRQSLPIYKLRDELVKAVTDNQILIVIGETGSGKTTQITQYL
AEAGFTSRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETSIKYMT
DGMLLRECLMDLDLKMYSVIMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDA
VKFSQYFFEAPIFTIPGRTFPVEVMYTKEPETDYLDAALITVMQIHLREPPGDVLLFLTG
QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIA
ETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRL
YTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLH
SLSALDNEGLLTRLGRRMAEFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPK
DKQALADQKKAKFNQAEGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQL
LGIMDRHKLDVVSAAKNTVRVQKTVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALF
NRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLY
NKYEEPNAWRISRVRRRRN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatgaggttgcgaaattggagcatttgtctcttgtttcaaaaatatgcaca
gagttggagaatcatttaggcctaaatgataaggatttagctgaatttattgttgacctg
gccgaaaaaaataacagtttagagtcgttcaaaaaagtactcgtcgaaaatggggctgaa
ttctcggactccttcatggcaaatcttctgaggattatacaacacatgaaaccgtcaaaa
cagttgaatgacaaatctcacaatgcaaaccacaggcaggatgacttgtcgttaaagttc
ccaggcctggctataccaaatgagcataagaacctccagcctattaaagaggagaaggat
gaagatgtagttaatgataccatggctgcgctagaagccctcgctccttcaggttcaaaa
actcaacctgattcaaagaaagagcaagaaggacctgtagttgatgccgctaacgataaa
aaagataaagatagagataggagaaaaaacagatcaaaagatcgcaagcgggacagatca
acatcacgtaatcatagagatagaaaacacagatcacgatcacgggatcggtccagatct
agagacagaaatcgggatcggagacgccgtgcgtcaagagatcgcaagagatctagatca
agaggtgcacgttcaagatcccgaaatagacgttccagatcacgggatcgcaagatttct
aaacgcaacaaacggcatgaaacggaacgctcaagatcgcgttctgtagaagaacttgca
gttgatccagaagtgggaaaaatttacactggaaaagttgcaaatattgttcagtttggg
tgttttgtacagctggaaggtttgaagcgcagatgggagggtttggttcatatttcacaa
cttcggcgcgaaggtcgtgttgccagtgccagtgacatcgtttcaagaggacaaaaagtg
ttggtcaaagtactgagtgtagctgctcaaaaggtttctctgagcatgaaagatgttgac
caagagactggaagggatttgaatccagttgtgagtattgccaaggcagacgaggatgaa
aaacatttacgaaatcctgacagaccaacatctttgctggaactgcaaggacatttagat
gaggatgaaacatattctagaaaacgtgtgcaaagattatcctcccctgaaaaatgggaa
ataaagcaaatgatgtcagcagcttgtatcgacaggagcgaacttccagaattcgatatt
gaaacgggaattttgcctcgtgaggacgatgaagaagaagatgttgagattgaattggta
gaagaagaaccaccattcttacatgggcacggtagagctcttggtgatttgagtcctgtt
cgaattgtaaagaatcctgatggatcgttggcacaagctgctatgatgcaaagtgctctg
gcaaaggagagacgagaacagaaaatgctacaaagggagcaagaaatggattccatacct
gcaggactgaacaaaaattggattgatcctttacctgatgcggaaagtcgaactttagct
gcaaacatgcgtggtataggattacagacacaagaccttccggaatggaaaaaacacgta
attggtggtaaaaaatcctcatttggtaaaaaaaccaatctaacactgttggaacagaga
caaagcttgccaatttacaagctcagagacgaactggtaaaagcagtaacagataatcaa
attcttatcgtcattggcgaaaccggatctggtaaaacaacacaaattactcaatatctt
gccgaagctggttttacgtcgcgtggtaaaataggatgcactcagccaagacgagtcgct
gcaatgtctgtagccaaaagagttgccgaagaatttggttgtagattaggacaggaagtt
ggatatacaatacgttttgaagactgtactagtcctgaaaccagcataaagtacatgaca
gatggtatgttactccgagagtgcctcatggatcttgatttgaaaatgtattctgttata
atgttggatgaggcacatgagcgtactatccatacagacgtactctttggtttattgaaa
caagctgtcggccgacgtccagatttgaagctcatcgtcactagtgctactctcgatgct
gttaaattttcacagtacttctttgaagcaccgatatttacaattcctgggcggacattt
cctgttgaagtgatgtacacaaaagaaccagagacggattatttagatgctgcattaata
actgtgatgcagattcacttacgcgaaccacctggagatgttttgttatttttaactgga
caggaagaaattgatactgcttgtgaaattttatatgaaagaatgaaatctctgggccca
gatgtacctgagttgatcatattaccagtttattctgcgttgccctccgaaatgcaaaca
agaatatttgagcctgctccacctggatccagaaaagttgtcatagcaacaaatattgca
gaaacgagtctcactatcgatggtatatactacgtcgtggatccgggttttgttaagcaa
aaagtttataattctaagactggaatggacagtctaattgtcacgcccattagtcaagca
gctgctaaacagagagctggtagagctggaaggaccggtcctggaaaatgttatagatta
tacacggaaagagcttacagagatgaaatgttgccaacgccagtgccagaaattcagcga
acgaatttagcaacaacagttttacagttaaaaaccatgggaattaatgatctgttacac
tttgacttcatggatgctccacctgttgaatctttgattatggcgttagagtccctgcac
agtttgagtgctctagacaacgaagggttattgacaagactgggcaggcgcatggctgaa
tttccactagaaccgaatttatccaaaatgttaattatgagcgtccacttgcaatgctca
gacgaaattcttaccattgtcagcatgctttcagtacagaacgttttctacagacccaaa
gataaacaagcacttgcagaccaaaagaaggcaaagtttaaccaggcagaaggcgatcat
ttgacattattagcagtttacaattcttggcgcaataataaattcagtaatgcttggtgc
tacgaaaatttcgtgcaaataaggactttgaaaagagctcaagatgttcgcaaacagctg
ctaggtataatggacaggcacaaattggacgtcgtgtctgctgcaaaaaatacagtgaga
gtacaaaaaactgtatgttctggattcttcagaaacgcggcgaaaaaagatcctcaagaa
ggatacagaacgctggttgatagccaagttgtttacattcatccaagtagtgcattattc
aataggcagcctgaatgggtgatttaccatgaacttgtccaaaccacaaaagaatatatg
cgagaggtgacgaccattgatccgaagtggctggtcgaatttgcaccggcatttttcaaa
ttcagtgaccctacgaaattgagtaaattcaagaagaatcaacgattagaaccattatac
aacaaatatgaagaacctaatgcgtggcgtatatccagagttcgaaggcgtagaaattag
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integrated database retrieval system
