Diprion similis: 124405854
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Entry
124405854 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124405854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124405854
03009 Ribosome biogenesis [BR:
dsm03009
]
124405854
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124405854
Spliceosome [BR:
dsm03041
]
Complex A
U1 snRNP components
U1 related factors
124405854
Complex B
124405854
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
Pre-60S particles
Helicases
124405854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124405854
NCBI-ProteinID:
XP_046737062
LinkDB
All DBs
Position
4:13025650..13031890
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AA seq
611 aa
AA seq
DB search
MSFRDRDRGDRRGGSRGGSRFGGRDSGGGGRFGSGGGGGGRDAGRDNGFGGNSFKNKQPG
ERLRKPRWDMSSLQPFSKDFYQPHPNVLARSPHMVEIYRSDKEITVKGSNIPGPNIYFEE
GGFPDYVLNEIRKQGFSQPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINN
QPRLQRNDGPVALVLAPTRELAQQIQQVAADFGSTSQVRNTCIFGGAPKGPQARDLERGV
EICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMW
SATWPKEVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKEGKLMKLLEEISN
EPENKTIIFVETKRKVDDITRAINRFGWQAIGIHGDKSQQERDYVLNQFRGSRSAILVAT
DVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKANDLIQ
VLEEAKQVVNPKLYELSRNPGVYKRGRFGGRSGGGSSGGRGGGGPRGSRGGRDGGDRGGR
FDRGSNTGDRSGKWSSGGGGSYGSKSFGHNSYTSNASGGGSYGHNNGSSSYSGGGGGGSG
SGGGYRHQNGY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgagacagagatcgcggggacagacgaggagggagcagaggagggagcaga
tttgggggtagagacagcggcggaggaggccgctttgggagcggcggaggaggtggcgga
agagacgctggtcgagacaatggatttgggggcaattcattcaaaaacaagcagcccggc
gagcgtctgcgcaagccgagatgggacatgagttccctgcagccgttcagcaaggacttt
taccagccacaccccaacgtcttggcaaggagtcctcacatggttgaaatatatcgttca
gataaagaaataactgtaaaaggatccaacattccaggaccaaacatatatttcgaggag
ggtggcttccctgactacgtcttaaacgaaattcgcaagcaaggcttcagtcaacccact
gcaatccaagctcagggatggccaattgctctctccggccgtgacatggttggaatcgct
caaactggctcaggaaaaacgcttgcctatatcctacctgctattgtccacataaacaac
cagccacgacttcagcgcaacgacggacctgttgctctggttctagcaccgaccagggaa
cttgctcagcaaattcagcaggtggctgctgacttcggaagcacatctcaagttcgtaat
acttgcatatttggaggtgcaccaaaggggccgcaggccagagacctggaaagaggtgtt
gagatatgcattgcgactccggggagattgatagactttttagaaagagggactacgaat
cttcgcaggtgtacctaccttgttctcgacgaagctgacaggatgcttgatatgggattc
gaaccacagattaggaaaatcgtcgagcaaatcagacccgacagacaaactctcatgtgg
tctgccacgtggcccaaagaggtccgcaacctggccgaagagtttctgacagattacatt
cagattaatattgggtcccttcagctcgctgctaatcacaatatacttcaaatcgtcgac
gtttgtgaggagtacgaaaaagaagggaaactcatgaagctacttgaagaaatttctaac
gaacctgaaaataaaactattatctttgttgaaactaagagaaaggttgacgatattaca
agagctatcaacaggttcggatggcaagcgatcggcattcacggtgataaaagtcagcaa
gaacgtgattatgttttaaatcaattccggggtagtagatctgcaattttagtcgcaact
gacgtggcagctagaggtttagatgtcgaagatgtgaaatttgtgataaatctggactat
ccctcgaattctgaggactacgttcatcgcattggtcgcactggtcgttcccagagaact
ggtacagcatatgctttctttacacctggcaatgcgcataaggctaacgatcttatccaa
gtcctagaagaggccaagcaagtcgtcaatccaaagctgtatgagctttcacgaaatccc
ggagtttataaaagggggagattcggaggtcgtagcggaggaggtagttcaggaggtcgt
ggtggaggtgggccacgaggttcgcgcggtggtcgcgacggtggagatagaggaggcaga
tttgatcgtggcagtaatacaggtgacagatcagggaaatggagtagcggaggaggtggg
agctacggcagtaaatcattcggtcataacagctataccagcaatgccagtgggggaggt
agctacggtcacaataacgggagcagcagttacagcggaggtggtggtggtggtagcgga
agtggtggtggttacaggcaccaaaacggttattaa
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