Diprion similis: 124405907
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Entry
124405907 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124405907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124405907
03009 Ribosome biogenesis [BR:
dsm03009
]
124405907
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124405907
Spliceosome [BR:
dsm03041
]
Complex A
U1 snRNP components
U1 related factors
124405907
Complex B
124405907
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
Pre-60S particles
Helicases
124405907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Imm64
Motif
Other DBs
NCBI-GeneID:
124405907
NCBI-ProteinID:
XP_046737133
LinkDB
All DBs
Position
4:14148259..14152726
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AA seq
579 aa
AA seq
DB search
MTHRPERHNLWPTPAIDAERVCSKNAKVPGAGSNGTLFIRGPCRPNTNREPDISRRISFN
RDRDQNRGRRGGGSRGGSRGSGSDSGSRFGGRGGGGSGNLKGKQPGSALRKLNWDVRSLE
PLRKDFYVEHPSVRTRSREEVDRFREAAEITVKGDKVPNPIQYFEEGNFPSYVMEGIRRQ
GYAQPTAIQAQGWPIALGGKDLVAIAQTGSGKTLGYILPAIVHIINQPRLNSGDGPIALI
LAPTRELAQQIQEVANCFGETASVRNTCVFGGAPKGPQAHDLERGVEICIATPGRLIDFL
EKGTTNLRRCTYLVLDEADRMLDMGFEPQIRRIIEQIRPDRQVLMWSATWPKEVRALAED
FLSNYTHLNIGSLTLSANHNIIQIVDVCQEFEKDMKLFRLLQEIGTEKENKTIIFVETKR
KVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDVAARGLAELMHSS
GLNPKMLPLSHIRHNRCVCLTARLILNFYNKPTEIGIAPFCMQMKSISPFESGLAGERHI
LDFFPYVSDLIYLCEVHQVLHVFQALVTQTNIELKITRN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacccatagacctgaacgacacaacctctggcccactccagcgatagacgctgaacgt
gtgtgttcaaagaacgccaaagttccaggagcaggtagcaacggcaccctgtttattcgt
gggccttgcaggccgaacacgaaccgagagcccgatatatcgagacgtatctcgttcaac
agagatcgagatcagaatcgaggacgtcgtggtggtggtagccgaggaggaagccgtggt
tctggaagtgacagtgggtcgaggttcggaggtcggggaggtggtggatctggtaatctg
aaaggaaaacagccaggcagtgccttgcggaaactcaactgggatgtgagatctctggag
ccattacggaaagacttttatgtagaacatccatccgttagaacaagatcaagagaagaa
gtggatcgattcagagaagctgcagaaattaccgtcaaaggagataaagttccaaatccg
atacaatattttgaagaagggaactttccttcgtacgttatggaagggatccgcaggcag
ggttacgcacaacctaccgctattcaagcacaggggtggccaattgcgcttggtggaaaa
gatctagtcgctatagcacaaactggatctgggaaaacactcggctacatactgccagct
atagtacacatcataaatcaacctcggctgaacagtggtgatggtcctattgctctgata
cttgcccctaccagagaactggctcaacagattcaagaagttgcaaattgctttggagaa
acagcctccgtaaggaacacatgtgtctttggtggggcaccaaagggcccacaggctcat
gaccttgaaagaggtgtagagatttgtatagcaacaccaggaagacttattgattttcta
gaaaaagggacaaccaatctgcgtagatgcacatatctcgttttggatgaagcagataga
atgctcgatatgggtttcgagccgcaaattcgcagaatcattgaacaaattaggcctgat
cgtcaagttttgatgtggtcagcaacatggccaaaagaagtacgtgcactagcagaagat
ttcttgtccaactatacgcatctcaatatcggatctttgacgttgtcagcaaaccacaac
atcattcaaatagtggacgtttgtcaggagtttgaaaaagacatgaagttgttcaggctt
ctccaagaaattggcacagaaaaagaaaacaaaactataatatttgtggagaccaagaga
aaggtagacgatatcacacgaaatatcaggcgagatggctggcaagctctaagtattcat
ggagataaaaatcaacaagagagagatcatgtcttgcaagaatttcgtagtggaagagca
ccgattttagttgccaccgacgtagcagcccgtgggttagcggaactaatgcactcgtca
ggtctaaaccctaaaatgctgcctttatcccacatcagacacaatcgctgtgtctgtcta
actgctaggctgatactaaatttctataacaaaccaactgaaattggcatcgcaccattc
tgtatgcaaatgaagtccatctcgccgttcgagtcgggacttgcaggcgaaagacatatt
ttagatttcttcccctatgtttctgatttgatttatttgtgtgaagttcaccaagttctc
catgtctttcaggccttggttacccaaactaacatagaattgaaaatcacacgcaattaa
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