Diprion similis: 124406842
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Entry
124406842 CDS
T08947
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124406842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsm03021
]
124406842
03041 Spliceosome [BR:
dsm03041
]
124406842
03036 Chromosome and associated proteins [BR:
dsm03036
]
124406842
Transcription machinery [BR:
dsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124406842
Spliceosome [BR:
dsm03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124406842
Complex B
124406842
Complex C
U2 SnRNP specific factors
124406842
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124406842
TFTC complex
124406842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124406842
NCBI-ProteinID:
XP_046738431
LinkDB
All DBs
Position
6:complement(6060853..6067732)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYIPAKNAFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDPEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKHSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMTCQVADLANEDT
PQLYMTCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRVDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAAGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGSKESDNSEDSASQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSW
LSYYYQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFVIHPDSAHLIILETEHNAYTEETKQQRRLQMAEEMQEAAGAEEAAVARELAE
AFLSEEPNEAVFGAPRAGPGLWASTLRLMAPATGQTLELHRLEQNYAALCLALVRFANQG
DQQFLIVGVAKDYQLNPRVSNGGFLYTYKVNIDCTNLELMHKTVMDEVPLAICSYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAVGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWVTTTCVLDYDTVATADKFGNIAVIRLASGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKGISGDLERT
PSEVSKKLEDVRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtataatctaacactgcagcgcgccaccggcatcacccatgccgtccacggg
aatttttccggtagtaaaatgcaggagatacttgtatcacgtggcaagtcgctagagctg
ctcaggcctgacccaaacactggaaaagttcacaccctcctgaccgtcgaagtctttggc
atcgtcaggtctctaatggccttcaggcttactggaggcaccaaggattatattgtcgta
gggtccgactctggtcgtattgtcattctagaatatattcctgctaaaaatgccttcgac
aaggtgcatcaagaaacctttggcaaaagtggttgcaggagaatcgtacctggacaatac
ttggctattgatccaaaaggaagagcagttatgatcggtgctatcgagaagcaaaaactg
gtttacatattgaacagagatccagaagcccgtttaacaatctcgtctccacttgaagcc
cacaaaagcaacactttagtatatcacacagttggcgtagatgtcgggtttgaaaatccg
atgtttgcctgcttggagattgactatgaggaagcagatagtgacccgactggagacgca
gctgttaagactcagcaaactttaaccttatacgagcttgatcttggattgaatcacgta
gtgagaaagcacagcgaacctctagaggagcatgcaaatttccttgtttctgttcctgga
ggaaatgatggtcctagtggggtcctcatctgttcagaaaattacctaacgtacaagaat
ctcggcgatcagcacgatatacgttgcccaatccccagacgtagaaatgacttggacgat
cccgaacgtgggatgatcttcgtctgttcagcaactcacaaaaccaagagcatgttcttc
tttcttgcccaaactgagcaaggggatattttcaaaatcaccttagaaactgacgaagat
atggtaacagaaataaaactcaagtatttcgacacagtgcctgtcgccacaagtatgtgc
gtcctgaaaacaggcttcttgttcgtcgcttctgaatttggaaaccactacctataccaa
attgctcatcttggtgacgatgacgacgaaccagagttcagttcagcaatgccactcgaa
gaaggtgatactttcttttttgctcctagaccactcaggaatttggttctagtcgatgaa
atggacagcctatcaccgatcatgacctgtcaggtcgctgatttggccaatgaagatact
cctcaactgtacatgacttgcggtagaggtccaagatccacgctgcgagtcctgcgtcat
ggtctagaagtttcggagatggcagtcagtgagcttcccggtaacccgaatgcagtatgg
acagtgaaacgaagagttgacgaggagtatgatgcatacatcatagtgtccttcgtcaat
gccactcttgtgcttagcatcggggagaccgttgaagaagtaacggactctggtttcctt
ggtacaacacctaccctcagttgttctgcccttggagaagacgccttagtacaggtatac
cctgacggaattcgtcacattagagccgacaaacgagtaaacgagtggaaagcaccaggt
aaaaagaccattgtaaaatgcgctgtgaatcaacgccaggttgtgattgccttgacagga
ggagaactggtctactttgagatggatcctactggccaattaaatgagtacacagagagg
aaaaaaatgccatccgaagtgatgtgcatggcccttggtaacgtcgcggcaggcgaacaa
agatcctggttccttgctgttggacttcaagacaataccgtcagaatcatttccctagat
ccgtctgattgtctggcacccagaagtatgcaggccttgcctgcagctgctgagagtctc
tgcattgttgaaatggggtctaaggaatctgacaattcggaagattctgcctctcagcaa
tcaagtttatacctaaacataggtttgcaaaatggcgtacttctgagaacggttttggac
ccgatttccggtgatttagccgatacccgaactcgatatttggggtcgcgaccggtaaaa
ttgttcagaataaagatgcaaggcaatcaagcggtgttggcaatgtccagtcgctcttgg
ctcagctattattatcaaaatcgttttcatctaacacctttatcatatgaaagcctggag
ttcgcgtccggtttcagttccgaacaatgtcccgaaggcatcgttgccatatccacaaat
acactaagaattcttgctctcgaaaaacttggcgctgtttttaaccaagttagtttcccg
cttgaatatacgccgcgtaaatttgtgattcaccccgattctgcccatctaatcatcctt
gaaaccgagcacaatgcatacactgaagaaactaagcaacaaagacgcctacaaatggcc
gaggaaatgcaggaggccgccggagccgaggaagcggctgtcgccagagagttagctgaa
gcttttctgtctgaagaaccaaatgaagcagtattcggagctcctagagccgggccaggc
ctgtgggcttcaactttgagactgatggcacctgccactggacaaaccttggagctacat
cgactggagcaaaattacgccgctttgtgtttggcattagtcagatttgctaatcaaggt
gatcaacaattcctcatcgttggtgttgcaaaggattatcagctcaatcctagagtgagc
aacggcggatttttatacacttataaagtaaacatagactgtacaaaccttgaacttatg
cataaaactgtgatggacgaggttcccttagcaatttgttcttatcaaggacgggtattg
gtgggagttggaaggatgctgcgtctgtacgatatgggaaagaagaaactcttgcgaaaa
tgtgaaaacaagcacattccaaatgccgtagtatcaattaacgccgtaggtcaacgtata
tacgttagcgatgttcaggaatccgtgtatgcagttagatacaaacgacaagaaaatcaa
ctaatcgtatttgctgacgatacgcatccgcgatgggtcacgacgacttgcgttcttgac
tacgataccgtcgcaacggctgataaatttggaaacattgctgtgattcgtctagcttcg
ggaataaatgatgacgtcgacgaggatccaaccggaaataaagcactttgggatcgcggg
cttctgaacggagccagtcaaaaagccgataccgtagcgtgtttccacgtaggagagact
gtgatgtcgttacagaaagctacgttaatacctggaggttctgaaagtttggtgtatacg
acgttgagtggaacagttggtgttcttgtaccattcactagtcacgaggaccacgacttt
tttcaacatttggaaatgcatatgagatcggaacatccgccgctatgcggtcgtgaccat
ctttcatttcgatcttattattatcctgtcaaaaatgtaatagacggtgatctttgcgaa
cagttcaattcaattgaaccgaccaaacagaagggtatatcgggtgatctggaaagaacg
ccctctgaggtctcaaaaaaacttgaggacgtcagaactcgatacgccttctaa
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