Diprion similis: 124406849
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Entry
124406849 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124406849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124406849
03009 Ribosome biogenesis [BR:
dsm03009
]
124406849
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124406849
Spliceosome [BR:
dsm03041
]
Complex A
U1 snRNP components
U1 related factors
124406849
Complex B
124406849
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
Pre-60S particles
Helicases
124406849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124406849
NCBI-ProteinID:
XP_046738444
LinkDB
All DBs
Position
6:complement(6029225..6036304)
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AA seq
591 aa
AA seq
DB search
MGRYRSRSRERDRRRKSRSRSRSRSPRDRRGWGGPGGGGGGPGRDRGGGGGGGRGGRGQP
GANLRKPRWDLSRLEPFKKDFYVPSDVVQHRDPRVVEQYRSDKEITLKGRNIPNPVFTFE
EAGFPDYVLKEVKRLGFKEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHIN
SQPKLSRKDGPVALVLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGG
VEIVIATPGRLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM
WSATWPKEVKNLAEDFLKDYTQINVGSLQLAANHNILQIIDVCQDYEKENKLSTLLKEIM
AENENKTIVFIETKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVA
TDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLI
QVLKEANQVINPKLLELTDSRGGGSSGGGIFGRHRGGRSRWRSKGGGGGAGGGGRGGRDR
SFSRSRSRSRSRERNGRGGGRRSYSRSYSRSRSPVNNRTEVIGKSYWSSER
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggccgttatcgaagccgtagccgagaaagggataggaggcgcaaatctcgcagccgg
tcccggagcaggtcgcctagggatcgacgtggctggggaggacctggcggtgggggagga
ggtccaggacgtgacagaggaggcggtggaggcggaggtcggggcggcagaggccagcct
ggagcaaatctccgaaagccgcgctgggacttgagccgtttagaaccattcaagaaggac
ttctatgtgcctagcgatgttgtacaacatagggatccacgtgtcgtcgaacagtacaga
agtgacaaagaaatcacccttaaaggaagaaatatacctaatcctgtattcacgtttgaa
gaagctggatttcctgattatgtcctgaaagaagtcaagaggcttggattcaaagaaccg
acatcgattcaagcccaaggatggccgattgctttgagtgggcgggacatggtgggaata
gcctcaactggatcaggaaagaccttatcttacatactgcccgccatagtgcatataaat
agccagcctaagctaagccgcaaagatggtcctgtagctctagtcttggctccgacgcgg
gaattggctcagcaaatacagcaggttgctgacgactttggtcattcgtcaggcatcagg
aatacatgtttgtacggaggtgcgccgaagggtgcacaggctagggatctcgatgggggt
gtagaaattgtgattgcaacacccggtagattgttggattttttagaatccggtagaaca
aacctgaaaagatgcacatatctagtactcgatgaggctgatagaatgcttgatatggga
tttgagcctcaaattagaaaaattatagaacaaattagaccagatagacaaacgcttatg
tggtctgcaacatggcctaaagaagtaaagaatctggccgaagactttcttaaggactac
acgcagataaacgttggctctctgcagcttgcggctaatcacaatattctccaaattatt
gacgtatgtcaagattacgaaaaggagaacaaacttagcacattgttgaaagagataatg
gccgaaaatgagaacaaaacgatagtttttattgaaaccaaacgcagggtggacgaaata
actagaaaaatgaagcgtgatggctggcctgcagtctgtatacatggggacaaaacacaa
caagaaagagactgggttttacaagattttcgatctggcaaagcaccgatactagtagcc
actgatgtagcagcaagaggtcttgacgttgaagacgttaaatttgtcatcaattttgac
tacccttcatgttccgaggactacgtccacagaatcggccgaacaggtcgaaggcagaag
actggaactgcctacaccttcttcactccaaacaactcgaacaaagcaaacgatttgatt
caagtattgaaagaagctaatcaagttataaatcctaaactactggaactcactgatagc
agaggtggtggtagcagcggtggcggtatatttggaaggcatagaggaggaagaagcagg
tggcgttctaagggcggaggaggcggagcaggaggaggagggagaggtggaagagatcgc
agtttctccaggagtcgaagtcgcagtcgtagtcgtgagcgcaatggtcgaggaggaggt
cgtcggagctacagccgaagctactcccgcagtcgcagccccgtaaacaatcgcacagaa
gttattggaaagagttactggagcagcgaaagatga
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