Diprion similis: 124407339
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Entry
124407339 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase Ddx1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124407339
03016 Transfer RNA biogenesis [BR:
dsm03016
]
124407339
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124407339
Spliceosome [BR:
dsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124407339
Transfer RNA biogenesis [BR:
dsm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
124407339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Cas3-like_C_2
Band_7_1
Motif
Other DBs
NCBI-GeneID:
124407339
NCBI-ProteinID:
XP_046739339
LinkDB
All DBs
Position
6:complement(24517201..24522355)
Genome browser
AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVEDMDWMLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLKDIESGKATTSKASPQSSPHWTMSLFDRGRALAVTPDGLRCQSREQREWHGC
RATKGVQGSGKFYYEATVTDEGLCRVGWSMPQANLDLGTDKFGFGFGGTGKKSNAKQFDN
YGEPFGMHDVIGCLLDLTNAEIRFTKNGVDLGQAFSLNAQQKSSIFFPAVVLKNAEMAFN
FGAQPFKHSPPEGYIAVSAAPKSCTRDNTVSGSSQSGVDNLKPSNNAPQTIIIEPSRELA
EQTFNQIQKFKKHLDNPKVRELLLIGGVNVKEQISALNSGIDIVVGTPGRLEDLIQGGYL
SLTHCRFFVLDEADGLLKQGYTELIDRLHRQIPKITCDGRRLQMIVCSATLHAFEVKKLA
DRLMHFPTWVDLKGEDAVPETVHHVVVMVDPQKDKSWQSLRTHIRTDGVHYRDNVKPGNN
TAEALSEAVKTLKGEYCVRAIREHKMDRAIIFCRTKIDCDNLESYLKSIGSSEFTCVCLH
GDRKPQERKANLEKFKRQEVKFLICTDVAARGLDITGLPFMINITLPDEKSNYVHRIGRV
GRAERMGLAISLVSSVPEKVWYHGEWCSSRGRNCSNTNLTDQGGCCIWYNEPRYLGEIED
HLNVTIQQVGPDIKVPLNEFDGKVTYGEKKVNSGTGYQNHVAQMAPAVSQLAALESKAQL
IYLKRHMSVGKSV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttgaagaaatgggcgtactgcctgagatagccaaggcagttgaagacatg
gattggatgttgccaacagacgttcaagctgaagcgattcccctcattttaggaggagga
gatgtcttgatggctgcagaaactggtagtggtaaaactggtgccttctgtttaccaatc
cttcaaactgtatgggaaactctgaaggatatcgaatctggaaaagcaactacctccaaa
gccagtccacagtcctccccacactggacaatgagtttatttgataggggccgagcactt
gccgttactccggatggtttgcgatgtcaaagtcgtgaacaacgagaatggcatggctgt
cgtgcaaccaaaggtgtccagggtagtgggaagttttattatgaagctactgtgactgat
gaaggtctttgtcgtgtcggatggtccatgccacaggcaaacttggatctgggaaccgat
aagtttggatttggttttggtggaaccggtaagaagtcgaatgccaagcagtttgataat
tatggagagccgtttggaatgcatgatgtgattggctgcctgttagatttgaccaatgca
gaaattcgttttactaaaaatggcgttgatttgggtcaagcgttttctttgaatgcgcaa
caaaaatcttccatattcttccctgcggttgtgttaaaaaatgctgaaatggcattcaac
tttggagctcaacccttcaaacactcgccacccgaaggctacatcgctgtttccgctgct
ccaaagtcttgcactcgagacaatactgtttccggaagtagccaaagtggtgtcgataat
ttgaaaccatccaacaatgctccacagaccataatcattgaaccgtctcgtgaattggct
gagcaaactttcaatcagatacaaaagtttaagaaacatttggacaatccaaaagtacgg
gagctcctgttgattggaggagtaaatgtcaaggaacagatttccgcattgaattcgggg
attgatattgttgtgggaacacctggccgattagaagacctaatacaaggtggctacttg
tccttgactcattgcagattcttcgtgctcgatgaagctgatggcttattaaagcaagga
tacaccgagctgattgatagactgcatcgacaaattccaaaaattacgtgtgatggtaga
agattgcagatgattgtctgttcagccactttacacgcctttgaagttaaaaaacttgcg
gatcgtttgatgcacttcccaacttgggttgacctcaagggtgaagatgcagttccagag
acagtgcatcatgttgtagtcatggtggacccccaaaaagacaaatcctggcagtcgttg
agaacacacattcgcacagatggagtacattacagggataatgtcaaaccaggaaataat
accgcagaggcactttccgaagctgttaaaactttaaaaggagaatactgtgtcagggcc
ataagagagcacaagatggaccgtgctattattttctgcaggactaaaattgattgtgat
aatttggagtcttatttgaagagtattggcagtagtgagtttacatgtgtatgtcttcac
ggcgatcgtaaaccacaagagcgaaaagcgaacttggaaaaattcaagcgtcaagaagtg
aagtttttaatttgtacagacgtcgctgccagaggattagacattaccggtctgcctttc
atgatcaacatcaccctaccagacgaaaaatcaaattacgtacaccgaatcggcagagtt
ggtagagcggaacgaatgggtttggctatttctttggtaagcagcgtaccggaaaaagtc
tggtatcacggtgaatggtgttcctccagaggcaggaattgcagcaacacaaatctaact
gatcaaggtggctgctgtatctggtataacgagccaagatacttaggagaaattgaagat
catttgaatgtgacaattcagcaagtaggtccagatatcaaggttcctttgaacgagttc
gacggtaaagttacttacggagaaaagaaggttaatagcggaactggataccaaaaccat
gtggcccaaatggctccagccgtatcccaattggcagcactggaatcgaaagcacagctt
atttatttgaagaggcatatgagtgttggaaaatcggtttag
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