Diprion similis: 124407414
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Entry
124407414 CDS
T08947
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
dsm
Diprion similis
Pathway
dsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124407414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124407414
03032 DNA replication proteins [BR:
dsm03032
]
124407414
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124407414
mRNA cycle factors
Common to processing body (P body) and stress granule
124407414
DNA replication proteins [BR:
dsm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
124407414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
zf-C2H2_2
Rod_cone_degen
Motif
Other DBs
NCBI-GeneID:
124407414
NCBI-ProteinID:
XP_046739479
LinkDB
All DBs
Position
6:7859139..7864483
Genome browser
AA seq
1027 aa
AA seq
DB search
MKKSFNPVADARNDCLDQTRRLYRGVTDIAQRLDEQRSRSLSVVDIFTPSGETLRAKLRD
YCERLIFKDTIGHARKIEELLWRRGFYDVVAAVKKLRKANSWNETEKAFLSTHLAVGVGF
YHHLILRLQLECNLDLMGVIDFAYPQNKEVLSNRKQKSLQSKMHAEEVRQCAIRFIHRSL
ICLGDLSRYKLDLDPYWDPKTATRYYKMAILIDPNIGMPHNQLGTMSGNKNFGLDAVYYY
MRCMLCSESFEGAEGNLKRMITTHSFTGKEEDQLHRCIAQLLSLLQLWNSISPNSDSINQ
VSQELLTEIENCLTLETTESDSKKEEESSIQLYLQSFAEDEPYHLTDEMMFKIVVICFMT
IMKLQSKDSPEVRGVIAFTLAILSQLLQTTIERLQESVINISLLNGEEYVTSNPQFVGEN
GNDELKSDDIQEINGINIDNKQSVLNCDNNFLDINDNRKHSDNIEDIVIGVDDLLNGAKK
SKDKSKSLLTKLRRPRRRKNSSDSDASDADGATIGSSSDELNSDISETEEDALSEEIILS
DDAVSEDLSDTEVDKVINKEQDSAVGNETSIIDEANPTLTEIKESKNTVKASISSNGVNE
TVLKDDRDSTTNSGSAITVTTNVDSSSAYDESNGSNNTVTYIAQLKKQSLGAAEIINVLM
GEGILASIKVCFDWLIGNPDIVQSCAKSSSTLLKRISTLLNLININADALFKNPENITLF
QNLNSQNLIKSVEVVPLPEDIELKGLKVFDNTQKILDWEFLKKFRMNKREETLLRSMKLI
KFGHFLCAMEESGMSYDETRQLFVTSDVDNSTVSNVDSKKEKKESEADHPQGKLMRHMGR
LWLKAEVRALETRLRSRLMSPYLVPDHEALSKHMPALKRLVYAKRFIVVIPSVVVSALDE
VKRTSSRAREATRWLEAQLRRGSRFLRAQRPHERLPIPLVKGPRPKDKEAWLYFQIIECC
HYLTNQTKVSLTSEGEAPVVTLLTGCSADEQKTANFSPVGLAKSAGVNLEHIESFHTKWK
ASSKSHG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcattcaaccctgtggcggatgccagaaacgactgcctcgaccagacgagg
cgtctttacagaggggtaacagatattgcccagaggctcgatgagcagaggagccggtct
ttgtcagttgtcgacatttttacaccgtcaggagaaaccctcagagccaaactaagagat
tactgcgagagactgatattcaaagacaccattggccatgctcgcaagatcgaggaactc
ttgtggcggcggggcttctacgatgtcgttgccgccgttaaaaaactgcgaaaggctaac
tcttggaatgagactgaaaaagcatttttatccactcacctggcagtgggtgtgggattt
taccatcacttgattctgaggctccagcttgaatgcaacctagatttgatgggcgttata
gactttgcctatcctcagaataaagaagtgttatccaaccgaaaacaaaagtctttgcaa
agtaaaatgcatgcagaggaagtaagacagtgtgctatacgatttattcatcgtagttta
atatgtttgggagatctatcaaggtataaactagacttagatccatattgggacccaaaa
actgcaactagatattacaagatggctattctgatagatccaaacattggaatgccccat
aatcaactgggaactatgtctggaaacaaaaattttggactcgatgctgtttattattat
atgagatgcatgttatgctcagaatcatttgagggtgcagagggtaatctgaagagaatg
attacaacccattctttcacgggcaaggaagaagatcaactccatcgctgcatcgcgcaa
cttctttctttgttacaactttggaattccatctctccaaactctgatagcataaatcaa
gtcagccaagaattacttaccgaaattgaaaattgtctcacacttgaaacaactgaatca
gacagcaagaaggaagaagaaagcagcattcaattgtacctacaaagttttgctgaggat
gaaccttaccatctaaccgatgaaatgatgttcaaaatcgtggtaatctgtttcatgaca
ataatgaaactccagagtaaagattcgccggaagttcgcggggtaatcgcattcactttg
gctattttatcccaattgctacaaactactattgagagattacaagagtcggtgatcaat
atctccctgctgaacggagaagaatatgtgacaagtaacccccaatttgtaggggaaaat
ggaaatgacgaattaaagagtgacgatattcaagagataaacggaattaatattgataat
aaacagagcgtactaaactgcgataataactttctcgatattaatgataatcgtaaacac
tcggataatattgaagacattgttattggtgttgatgatctattgaatggagccaaaaag
tcgaaagacaaatcaaagagtttattgaccaagcttagacgtcctcgaaggcgcaaaaat
agttctgactctgatgcgagtgacgccgatggtgcaacaataggatcttccagcgatgaa
ctgaactctgatatttccgaaactgaggaggatgctttgagcgaggaaattattttgtca
gatgacgctgtctctgaagatttgagtgataccgaagttgataaagtaataaacaaggaa
caagattctgccgttggaaatgaaactagtattatagacgaggcaaacccgactttgact
gaaattaaagagagtaaaaacactgtgaaagccagcatatcgtcaaacggtgttaacgag
acagttttgaaagatgacagggattccacgacaaattctggaagtgcaataaccgtaaca
acgaacgttgattcaagtagtgcttacgatgaaagtaatggctcaaataatactgtcacc
tatatagctcagttgaagaagcagagtctgggtgctgctgaaataataaatgttttaatg
ggcgaaggaattttggcatcaatcaaagtttgcttcgactggttgattggtaaccctgac
attgtgcagtcatgcgctaaaagttcaagtacactactgaaaaggatatcgacgttattg
aatttgatcaacataaacgcggatgctttgttcaaaaacccagagaacatcacactattc
caaaacctcaatagccaaaatttgattaaatctgttgaagtagtaccgcttcccgaagat
attgagctaaaaggccttaaagtttttgataatacgcagaagattcttgactgggaattc
ctaaagaaatttagaatgaataaaagagaagaaacgctactaaggagtatgaaattgatt
aaatttggtcattttctatgtgctatggaggagtctggcatgtcatatgatgaaactaga
cagctctttgttacctcggatgtcgataattccacagtatcaaatgtagatagcaaaaaa
gagaagaaggaatctgaggcagatcatccacagggaaaactaatgaggcatatgggaaga
ctgtggttgaaagccgaagttagagcattagaaacccgtttgcggtccagattaatgtcg
ccatatcttgtgcctgaccacgaggctctctcgaagcacatgccagcgctgaagcgtctc
gtttatgcaaagcgattcattgttgtcataccttccgtggtcgtttctgccttggatgag
gtaaagcgcacgagcagtcgagcaagggaagcaactaggtggctagaagcccaattgaga
cgtggttcgagatttttacgcgctcaaagaccgcacgaacggcttccaatccccctagtc
aaaggacccagaccaaaggacaaggaggcatggctctactttcaaataatcgaatgctgt
cactatctgacaaaccagacgaaagtcagtcttacgagcgaaggagaagcccctgttgtt
acgctactgactggatgcagcgcggatgaacaaaaaacggcaaatttcagtccagttggt
cttgccaaaagtgcaggagttaacctggaacatatagaatcgtttcacacgaaatggaag
gcgtccagtaagagtcacggttga
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integrated database retrieval system