Diprion similis: 124408003
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Entry
124408003 CDS
T08947
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dsm
Diprion similis
Pathway
dsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124408003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124408003
03009 Ribosome biogenesis [BR:
dsm03009
]
124408003
03036 Chromosome and associated proteins [BR:
dsm03036
]
124408003
Enzymes [BR:
dsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
124408003
Messenger RNA biogenesis [BR:
dsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
124408003
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
90S particles
RNase
124408003
Prokaryotic type
rRNA processing factors
124408003
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
124408003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
124408003
NCBI-ProteinID:
XP_046740600
LinkDB
All DBs
Position
7:6748238..6755102
Genome browser
AA seq
1611 aa
AA seq
DB search
MAMPPNNSGQPFYWGTGQPAVQNVGYYQVPPPNFPPPNLSQPPPSYNMPPPSIGENKLVN
VVQQQQLPGGRPRTYSSYTSNSTFVHHQACPIPNPSNSMYNTTNCQPPNFRPSTLGGYDN
YAWNLKNLNNADTEWNQMDAASGWKPYQGNHNAGCNKQGSSQSQSDENAKNLSPYTGQKP
SSRSLWIGPGVAQRTASDVPSLRHGTERRRSRSSDSHSITAGNRGYERSRHEDNKEKYER
RGREKSNTRGNYYNEESNRRSMYKKREPSSRCSSRTRMELGKTSFESRSRKRSRSRDSHV
STKSNEISNLPMNQRSLSERDQLLEKYRQNYCATSKDMEKKLDELSAMGPEGIIEHERKV
WTRTAPADLYYARNESNPKIMIGTPKLMELCDIFKKLLVDRSSTARALQPPYEPPPRKNR
ARLCRHKTEACSSSSSDSDTSMDEDDRTMEELMAKKQHPQRLHPEMWFNDPGEMNDGPLC
RCSAKSRRSGIRHGIYAGEGVIKKCALDSNNADKLYHYRITISPPTNFLTKTPTIIKHDE
HEFIFEGFSMLSHFPLVKLPTCKVIRFNIEYTILYINEKLPENFTIRELDLFQDYLFQQI
LELVDFDLRAAQDTAGCDQFHFMPRFVRDLPDNGQEILSMNEVLNYLIKSSKPLIDAEDL
SRLVDMPQYKWQNFADEVKGMVVTYPGKKPCSVRVDQLDRSQDDQPPGVISYPEIVHFGI
RPPQLSYAGNADYQKAWRDYVKFRHLLANMPKPSFEDKRKLEAKENKLQELRTQSKMKRD
VTVDVSSEGFHRTGIMCDIVQHAMLIPVLVCHLRFHKSLDILEKTIGYKFKNRYLLQLAL
THPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFGARRE
TESSIAHNERLEFLGDAVVEFLTSIHLFHMFPDLEEGGLATYRAAIVQNQHLAVLAKKLN
LEQYMLYAHGSDLCHDLELRHAMANCFEALMGSLFLDGGIEVADKVFAETMFMGECDLSK
VWINYPRHPLQEQEPTGDRQWIPSFELLQKLTKFEESIGIDFQHIRLLARAFTDRSIGYT
NLTLGSNQRLEFLGDTVLQLIVSEYLYKFFPEHHEGHLSLLRSSLVNNKTQAVVCDDLGM
TQYALYGNPKAELKTKDRADLLEAFLGALYVDKGLEFCHVFCDVCFFPRLQDFIMNQDWN
DPKSKLQQCCLTLRTMDGGEPDIPVYKVIECKGPTNTRIYTVAVYFQGKRLAKASGHSIQ
EAEMNSAKEALEKSQDLFPQLDHQKRVIAKSMKKQQWPNRQMLWAKAIRCNDRSDDSDSS
LKQNRRSRSRERENSDKRSRDRYDSSDRRHKESLKYFDKSDVCNNDQDRRTKERSFSKSN
DYRRNTEYEKSNDARNKEKIHSLSIESNHRYKEYDRCSSVDNRGNCQASGSGYRARDNFT
DANVEDTIEGRGKSSTPLRRGKDDDGQSSYKHMNQSVGTNDRMYEPDKTEWRNEAPAMKG
DNRNRGRYERQDDAERKRNTCAKNFVYNDINVQRQSNFERESKKRNVESNYESKTNRRIR
DYDSRRRQRFYENDRKRKRSFDDCRSSSEEGSVPEQYKSSNFSHRIKKKSM
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccaccgaacaactccggccagcctttttattggggaaccgggcagcccgca
gttcagaatgtcggttactatcaagttcctcctcccaattttcctccaccaaatttaagc
cagcctcctccgtcgtacaatatgccaccgccatctattggtgaaaataagctagtcaat
gtcgttcaacaacaacaattacctggcggtaggcctcgaacttattcaagctacacgtcg
aacagcacattcgtacaccatcaagcttgcccaattccaaacccttcaaattcaatgtac
aacactacgaattgccagccgccaaacttccgcccatcaacgttaggggggtatgataat
tacgcatggaatttgaaaaatctaaacaatgctgataccgagtggaatcagatggacgca
gcatccgggtggaagccgtaccaaggcaaccataatgctggctgtaataaacaaggatca
tcgcagtcacagtcggatgaaaatgccaagaatttgtccccatatactgggcagaaacca
tcgtcgagaagtttgtggatagggcctggtgttgcgcaacgtacagcatcggacgtgccg
agtctgcgacatggaacggaaaggaggaggtctcgaagttctgatagtcattccatcact
gctggcaatagaggctacgagagatcacgacacgaagataacaaagaaaaatacgagaga
cgaggaagagaaaaatcaaataccagaggaaattactacaatgaggagagcaacaggcgg
tcgatgtataaaaagagggaacctagttccagatgcagctctcgaactagaatggaattg
ggaaaaactagtttcgaaagtcggagtaggaaaaggtcaagatctagagattcgcatgtt
tccaccaagtcgaatgagatcagcaatcttcctatgaatcaaagatcgttgagcgaaaga
gatcagcttttagaaaaatacaggcaaaattattgtgcaacaagcaaagatatggaaaaa
aaattggatgagttgtctgcgatgggaccagaaggaataatagaacacgagagaaaggtg
tggacccgtacagcaccagccgatctctactatgcacgcaatgaatcgaatccaaaaatt
atgataggcactccaaaattgatggaattatgtgatattttcaagaagttattagttgat
aggtccagcacagctagagcattgcagccaccatacgagccaccaccaagaaaaaacaga
gccaggttgtgtaggcacaaaactgaagcgtgcagtagttcgtcatcagacagcgacact
tcaatggatgaagatgaccgaactatggaagaattaatggcaaaaaaacagcatccacaa
cgtctgcatccagaaatgtggttcaacgaccctggagagatgaatgacggccctctctgt
agatgcagtgccaaatcgagaagatctggtattcggcatggtatttatgctggcgagggt
gtaattaaaaagtgtgcattggattcgaacaatgcagataaattataccattaccgtata
actatcagtccaccgacaaattttttaaccaagactccaactatcatcaaacacgacgaa
cacgaatttatatttgaaggattttcaatgctctctcatttccctcttgtcaaattacca
acctgtaaagttattcgcttcaatatcgaatacacaattctttacatcaatgagaaattg
ccagaaaatttcaccatcagagaactggatttatttcaggattacctgttccagcagata
ttggaattggtagactttgatctgcgtgctgctcaagatacagccggttgtgatcaattt
cacttcatgcccagatttgttagagatttgccagacaacgggcaggaaatattgtccatg
aatgaagttctgaattatttgatcaaaagcagtaagccattaattgacgccgaagatttg
agcaggcttgtcgatatgcctcaatataagtggcagaatttcgctgacgaagtgaaaggt
atggtggtgacttatcccggtaaaaaaccttgcagcgtcagggttgatcaattagataga
agtcaagatgatcaacctccaggtgttatttcgtatcctgaaattgttcatttcggaatc
aggccaccacagctgagctatgctggtaacgcggactaccaaaaagcctggagggattac
gtgaaatttcgacatttgctggcgaacatgccaaagccatcatttgaagacaagagaaaa
ttggaggccaaggaaaataagctgcaagaacttagaacgcagagtaaaatgaagagggac
gtaacagtagacgttagttctgaaggatttcatcgtacaggaattatgtgcgacatagta
caacacgcaatgctgattcctgtactagtgtgtcatctgagatttcacaaatctttggat
atcctggaaaaaacaattggctacaaatttaaaaatagatatttgcttcaattggcctta
acgcatccaagttatagagagaattttggtacaaatccggatcacgcgaggaattcatta
acgaattgtggcataaggcaaccagagtacggtgacagaagaattcattacatgaatacg
cgaaagcgaggaataaacactttgataaacataatgtcaaggtttggggctagaagagaa
accgaatcttctatcgcgcacaacgagagattagaatttcttggtgacgcagttgttgag
tttttaacgtccatacatctgttccacatgtttcctgacttggaagaaggaggattagca
acatacagagcagccattgttcaaaatcaacacttggctgtcttagctaaaaagttgaat
ttggagcagtatatgctctatgctcacggcagcgatttgtgccatgacttggagcttcga
cacgctatggccaattgctttgaagctctgatggggtctctgtttcttgacggaggaata
gaagtagctgacaaagtatttgctgagacaatgttcatgggagaatgtgatctctctaaa
gtttggatcaattatccccgccatcctctgcaggagcaggaaccgaccggagatagacaa
tggataccgagcttcgagttactgcaaaaattaaccaagtttgaggaatcaattggcatt
gattttcaacatattcgattactcgcacgagcattcacagatcggagcattgggtatact
aatttaacgctaggatctaatcaacgtttggaattcctaggtgatactgttctgcagctc
atagtttctgaatatttgtacaaatttttccccgaacatcatgaaggacatctttcactt
ttacgaagttctttggtcaacaacaaaacccaagcagtagtttgcgatgatttgggtatg
actcaatacgccctttatggaaaccctaaagcggagctgaagacgaaagatagagctgat
ttgctggaggcttttctgggcgcattgtacgttgacaaaggtttggagttttgccacgtc
ttttgcgacgtgtgctttttccctcgtcttcaagatttcataatgaatcaggattggaac
gatccaaaaagtaaactgcaacaatgttgcctaactctgaggactatggatggtggagag
ccagatatacctgtatacaaagtaatcgaatgcaaaggtccgactaacacacgaatttac
acagtggccgtgtattttcaaggtaaacgattggccaaagcttctggccacagcattcaa
gaagcagagatgaactccgctaaagaagcacttgaaaaatcccaagacctattccctcaa
ttggatcatcaaaaacgggttatcgcaaagagtatgaaaaaacagcagtggcccaaccga
cagatgctctgggcaaaggcaattcgatgcaatgacagatcggatgattcagattcaagt
ttaaaacaaaacagacgaagtcgaagtagggagcgtgaaaattcagataaacgatcaaga
gatcggtatgatagttctgatcgtaggcataaggagtcactgaaatattttgataaatct
gatgtctgtaacaatgatcaagatcgtcgaaccaaggaacgatcttttagcaagagtaac
gattacagaagaaatactgaatatgaaaaaagtaatgatgctagaaataaggaaaagatt
catagcctttcaatagaatcgaaccataggtataaggaatatgataggtgttcaagtgta
gataatcgaggaaattgtcaagccagtggatcgggttatagagccagggataatttcaca
gatgccaatgttgaggatacaatcgaagggcgtgggaaaagttcaactccgttacgtcgt
ggaaaagacgacgatggacagagcagttacaagcatatgaatcaatcagtaggtacgaat
gatagaatgtacgagcccgataaaacggagtggagaaacgaagcgccagctatgaaaggt
gataatcgaaatagaggaaggtatgaaagacaggatgatgcagagagaaagcggaatacc
tgcgcgaaaaatttcgtttataacgatataaatgttcagaggcagagtaactttgagcgt
gagagtaaaaaaagaaacgtagaaagtaattacgaaagtaaaacgaacaggagaatccga
gattatgattctagacgtaggcaacgtttttacgaaaatgatagaaaaagaaaacgatct
ttcgacgattgcagaagtagcagcgaggaaggaagcgtaccggaacagtacaaaagtagt
aatttctcgcatcggattaaaaagaagtccatgtaa
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integrated database retrieval system
