Diprion similis: 124408304
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Entry
124408304 CDS
T08947
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
dsm
Diprion similis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsm03021
]
124408304
03036 Chromosome and associated proteins [BR:
dsm03036
]
124408304
Transcription machinery [BR:
dsm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124408304
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124408304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_9
HHH_3
Tex_central_region
Tex_YqgF
Spt6_S1
OB_RRP5_4th
S1_RRP5
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
124408304
NCBI-ProteinID:
XP_046741114
LinkDB
All DBs
Position
7:complement(2699292..2707161)
Genome browser
AA seq
1766 aa
AA seq
DB search
MADFIDSEAEESEEEEELDHNEKKKLKKIKAVEESDEDDEDDEDRLREELEDLIDDNPIE
ESEGEDSDGSGGSKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEES
EEEQEHEAVEERDAIANELFEGSGDEDERRSERSHRPEPETFDEEGSDGDYSEGDDFIVD
DDGRPIAERRRKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEDEDEEDEYVD
EDGDGERPRRPKKQPKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQLRSVP
VVPVPEGSDELDLEAEWIYKQAFCRPSVSVQDSHLNAEAKERARKGPQTVGKIKKALDFM
RNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDVKWCQLRQRKENLLQLFEKMRNYQLD
EIMKNAEAPLPEGLRLIKDDDIERLRNVQTSEELNDVHHHFMLYYSHEIPPMQEAVRKKE
REARVAARAAKRRQQIADAEENGEDPPPEDDIEADEEEEADETLKQAVRTGPYTICRKAG
LDGLAKRFGLSPEHYAENLRDNYQRHEVDQEPTEPSVVANDFCGKKFKTPEEALKATQLM
VAIQLAREPLVRKCVREMYMERAKLSVTPTKTGIKEIDENHPIYTMKYLKDKPVRDLVGD
QFLKLSIAEEDKLITISLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWNALRVASVEM
ALTKMVIPELKKELKANLIAEAKECVMRACCRKMYNWLKVAPYSCDFPEEEDEEWDTSKG
LRVMAVSYVPDYSKAAFTCLVAPDGECTDYLRLPHLMKKKNSFREDEKAMKEADLLAIRN
FIATKKPHVVVVSGTSREATMVVADIKECISNLVEEEQFPSIQVEVCDNELAQIYSNSNK
GVSEFRDYPELLREAISMARRMQDPLVEFSQLCTADEEILCLKYHPLQDQLPKEDLLENL
YLEFVNRVNEVGVDVNKAVQQAYAGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRTQLV
TACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDD
EDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRVP
YQTLSAEKLFDVLTKETPETFYIGKMVEATVCGITHRKPQGEQLDQANPVRNDETGLWQC
PFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLENNISGYIHIKNLSDKHVANPEERVR
VGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDMEAEQKDQQIEEDAKK
AKQRQTYIKRVIVHPAFHNISFAEAEKFMQNMDQGEAIVRPSSKGADHLTVTWKVTDKIC
QHIDVREEGKENTFSLGQSLWIGNEEFEDLDEIIARHVNPMAAHARDLLYFKYYKDTEGG
LKDKAEELLKDEKKKNPGKIHYFISAAKNYPGKFVLSYLPRVRCRHEYVTVTPEGFRFRG
QMFDNVNALFRWFKEHFRDPVPGQGTPSTPRGAMTSRTPYHNTPGVNMSSMNQEAIQRVA
QNLPHHMLHSLSQVANQTPHHYPPHTPGAASTGPYGGMHTYPNTPYTPSGQTPFMTPYQT
PHHTPHHGQPTPRYGQQTPNHHQGQFVHPGPTTVTSAHHRTTPSHRPTPHMSTLAGDPMD
WKKAAEAWAKLKQITPRISGNSTPRYEDSRKTPRGYDDGSGRATPRNRPPTARTPSYKSP
RGTPHTNSSPRSMSLSGDGTPLYDEN
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcatcgactctgaggcggaagaaagtgaggaggaagaggagttagatcac
aacgaaaagaagaaactgaagaaaataaaagctgtcgaggagagtgacgaagatgatgaa
gatgatgaggaccgtcttcgtgaagaactggaggatcttatcgatgataatcctattgaa
gagagtgaaggagaggacagcgatggttctggtggctcaaaaaagcgtaaaaagagtgac
gatgaagactttgatgatcgactggaagatgaggactatgatcttattgaggaaaacttg
ggcgtcaaagtggaaaggaaacgctttaaacgtctacgtcgaatacaagatgaggagtct
gaggaagagcaggagcacgaagctgtagaagaacgggatgctattgccaatgaattgttc
gaggggtctggtgatgaggatgaaagaaggagcgaacgtagccataggccagaaccagag
acttttgacgaggaaggttccgatggagattattccgagggtgatgattttattgtcgat
gatgatggaagacctattgctgaaaggcgaagaaagaagaaaccaatattctctgatgcc
gcgttgcaagaagctcaagatatttttggcgttgactttgactatgacgagtttggaaag
tatggggaagaggattacgaagaggaagaagacgaggacgaggaagatgaatatgttgac
gaagatggtgacggggaacgaccgcgtcgtccaaaaaaacaacccaaaaagaaaacaaca
cggaaaagtatatttgaaatatatgaacccagtgaactcaagcgaggacactttactgac
atggataacgagattcgtaatactgatatacctgagcgaatgcaactacgttcagtacct
gttgtcccagtaccagagggatcagatgaactggatttggaagcagagtggatttataaa
caggcattctgtcgtccatcggtctccgttcaagattctcatttaaatgctgaggccaaa
gaaagggcgcgtaagggaccacagacagtaggaaaaatcaaaaaagccttggactttatg
cgtaatcaacactttgaggttccgtttatatcattttatcgaaaagaatatgttttacct
gaactaaacataaacgatctatggaaagtatacaaatttgacgtgaaatggtgtcagctt
cgtcaaagaaaagaaaacttgttacaactgtttgaaaaaatgagaaattatcaactggat
gaaattatgaaaaacgccgaggctcctctgccagagggactgcgactgataaaggatgac
gatatcgagagattacgaaatgttcaaaccagcgaagaattgaacgatgttcatcatcac
ttcatgttatattacagccatgagattccacctatgcaagaagctgtccgcaagaaggag
agagaggcacgagttgcggcaagagcagctaaaagaagacagcagatagctgatgctgaa
gaaaatggggaggaccctcctccagaagacgacattgaagctgatgaagaagaagaagct
gacgagacgctgaaacaagctgtcagaactgggccttacactatttgtagaaaggctggc
ctggacggtcttgctaagaggtttggtttgtcaccagagcattatgcggagaatcttcgt
gataactaccaacgtcatgaagttgatcaggaaccaacggaaccctctgtagttgctaat
gacttctgtggtaagaaatttaagactccggaagaagccttgaaggccacgcaattgatg
gttgccattcagcttgcaagggaacctcttgttcgcaaatgcgttagggaaatgtatatg
gaaagagccaaactctccgtcacacctaccaaaacaggaataaaagagattgatgaaaac
catcccatatatacaatgaagtatctgaaagacaaacctgtaagagatcttgtcggcgat
caattcctgaaactaagtattgctgaagaagataaacttatcaccatttcactcagtgat
tcgattgagggcaatactagtaacaattatgtagatgaaatgaagcaactttattacagg
gatgaatttagtaagaatgttcaagactggaatgcattgagggtagcaagcgtggaaatg
gctttaacaaaaatggtgattcccgaattgaagaaggagttgaaggcaaatctaattgca
gaagctaaagaatgcgtgatgcgagcttgctgccgaaagatgtataactggctcaaagtg
gctccgtatagctgcgatttccctgaagaagaagatgaagagtgggatacgagcaagggg
ttacgtgtgatggctgtatcttatgtgcccgattattccaaagcagcatttacatgtctt
gttgcacctgatggcgagtgtacagattacctgcggctaccacatttaatgaaaaagaaa
aatagtttcagagaggatgaaaaagctatgaaggaagctgacttgctggctattcgtaat
tttattgcaaccaagaaaccacatgttgttgtcgtgagtggtacatccagggaggcgaca
atggttgttgctgatatcaaagagtgtataagtaacctggtcgaagaagaacaatttccc
tccattcaagtagaagtttgtgacaacgagctcgcccagatctactcaaacagtaataaa
ggagtgtcagaattcagggattatccggaattacttagagaagctatctcaatggcacgg
cgtatgcaagatcctttggtggaattttcacagctgtgcacagcggatgaagaaatcttg
tgtctaaagtaccatcctttacaagatcaactccctaaggaagaccttttagaaaatttg
tatttggaattcgttaatcgagtaaatgaggttggtgttgatgtgaacaaagcagtccaa
caagcttatgctggaaacttggtacaattcgtctgcggtttgggacctcgaaaagggcag
gccttgattaaaatgctaaagcaaactaatcaacgattagagaataggactcaattggtc
acagcttgtcatatgggtcctaaggtgtttatcaattgcgccggttttatcaagattgac
acaaacagtttgggagatagcaccgaagcatatgtggaagtgcttgatggctcgcgtgtt
catccagagacatatgaatgggccagaaaaatggcagtagatgcattggagtatgacgac
gaggatgcaaatccagcaggggcattggaggaaatcttagaatcgccggaaagattgaag
gatcttgatttagacgcgtttgctgaagaattagaaagacaaggttttggtaacaaatgc
ataacgctgtatgacatcagagcggaattaaatagcaggtacaaagaccttagggtaccg
tatcaaactcttagcgctgaaaaattgttcgatgtattgaccaaggagacaccggaaact
ttctatatcggcaaaatggttgaagccactgtatgtggcataactcacagaaaaccacaa
ggtgaacaactagatcaggcaaatccggtaagaaatgatgagacaggcctttggcagtgt
ccattctgtttgaagaatgatttccctgagttgtcagaagtatggaatcactttgatgct
ggagcctgcccaggaaaagctactggtgtcaggttgcgcttggaaaataatatatcagga
tatattcacatcaaaaatctgtctgataaacatgtagcgaatcccgaggaaagggtcaga
gttggccaaatcattcactgccgtataataaagattgaggtagacagattcagtgtggaa
tgtactagtaaaagcagtgatcttgcagataaaaatcatgaatggagaccgcaaagagat
ccgttttatgatatggaggcggaacagaaggatcagcagatagaggaagatgcgaaaaaa
gcaaaacaacgacagacttacataaaacgcgtcattgtacatccagcatttcataatatc
agttttgctgaagctgagaaattcatgcaaaatatggatcagggtgaagcgatagttcga
ccaagtagcaaaggtgcagatcacctcacagtaacgtggaaagtgactgacaaaatctgt
caacatatcgatgttcgggaagaaggtaaagagaataccttttctcttggccagagttta
tggatcggtaatgaagagtttgaggatctagacgaaatcattgccagacatgttaatccg
atggctgctcatgctagagatttattgtactttaaatactataaggacacggaaggtggc
ttaaaggacaaagcagaagagttattaaaagatgagaagaaaaagaatcctggaaagatt
cattatttcatatccgccgcaaagaattatcctggaaaatttgtattgtcttatttacct
cgcgttcgctgccgacacgaatatgtgaccgttacaccagagggattcagattccgggga
caaatgttcgacaacgtcaacgccttgtttcgttggtttaaggaacatttccgagaccct
gtccctggtcaaggaactccaagcacacctcgaggtgcaatgacgtctagaacaccatac
cataatactcctggtgtgaatatgtcaagtatgaatcaggaggcgatacaaagagtagcc
cagaatctaccgcatcacatgcttcattctctgtctcaagtcgcaaatcaaactccgcac
cattatccaccgcatactcctggcgcagcaagcactggaccgtacggaggcatgcatacc
tatcccaatactccttacaccccatcgggacaaacgccattcatgaccccgtatcagact
ccccaccacacacctcaccatggtcagccaacgcccagatacggccagcaaacaccaaat
catcaccaaggccagtttgttcatcctgggccaaccacagtgacgtctgctcaccataga
acaacaccttcacatcggccgacaccgcacatgtccacactggccggggacccgatggat
tggaaaaaggccgccgaggcatgggctaaactgaaacagatcacccccaggatctctggg
aacagcactcctagatatgaagactcgagaaaaactccgcggggatacgacgatggatca
ggtcgagctacaccccgcaacaggccaccaacagcacgtacaccgtcatacaaatcaccg
agaggaaccccacatacgaattcgagtcccaggagtatgtctcttagcggagacggtact
ccgttgtacgatgaaaattaa
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integrated database retrieval system
