Diprion similis: 124408581
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Entry
124408581 CDS
T08947
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dsm
Diprion similis
Pathway
dsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124408581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124408581
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124408581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DHC_N2
ARM_CUL7_CUL9
AAA_22
Methyltransf_1N
Motif
Other DBs
NCBI-GeneID:
124408581
NCBI-ProteinID:
XP_046741566
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Position
8:20239903..20246627
Genome browser
AA seq
1144 aa
AA seq
DB search
MPKVNTLFKYFTSPKTEKRLVKETSSPQRDSPKSNGDQKGKGTRGLKAGKENSNNENKRG
TPTSRHKNKSLSAATRKRSSNKETEDDESSRPKRRRLVIPSDNSDDSGEDYKPAADDASS
SEYSASEADSESEALSSGIESDEETPKKKRNVAPTKAPPKKNGRGKTQMKSEVKSSDPPS
QTAGNSSVNAQGWTHLKYDFLQTNKIKDIHRRPPSDPNYDPRTLYVPHEFKINQTPAMKQ
WWEMKCKNFDCVLFFKVGKFYELYHMDAVTGVNELGLSYMRGEFAHSGFPEIAYSRFASS
LIEKGYKVARVEQTENPEMMSARVSKMSHVTKFDKVVKREICQISSKGTRVFTAQDGETS
TASSTYLLSIVEKFNPSTPTSIYGVCFIDTSIGGFHLGQFEDDRHSSRLLTLVSHFPPSQ
AIYERGGISERTNKILNTMLATALKEPLQRETQFWSAATTLKKLHEGEYFKSEFNSDFTW
PEGLKPYLSDGDSLGLTAADNMELAVSALGGCVFHLKECFIDQQLLAQGRFESWIPPDHE
DRQSSGKLANNMVLDAITINNLRILGGPGSLISTLDHCCTPFGKRLLREWICRPSCRKFE
IMQRQQAVTELIDKIEITQNVRGSLAPLPDLERLLSKIHAQGNFAKGQSHPDARAIMYES
KTYSKRRILDFTNALHGFEEASKIIDSIGDVKCDLLKRCIKHNPEGEFPKLEEMLNYFKS
AFNQEEAKKEGCIIPKPGVDSEYDAVLEELSEIKRDLEKYLEGQRKHFGVKVNYYGTEKK
RFQIEVPDSQLRKVTTDYELQSQRKGFKRYYTTKAKELLERQMIAETNKDKVLKDISRRI
FAKFSEKYDVWCSAVYQLATLDVLTAFAEYSQSAEMSVPIIEDVTSEKSAFIDIRDGRHP
CVTSDDFIPNDTLLGTEDSASLVILTGPNMGGKSTLMRQVGLLTIMAQIGCHIPASSCRL
TLVDRIFTRLGANDDILTGQSTFFVELSETATILQHATANSLVLVDELGRGTSTYDGTAI
AASVVGALKERTCRTLFSTHYHALVEDYKLDKNVSLSHMACMVETEEEEEVSQETVTFLY
KLSKGACPKSYGFNAARLAGISSKITVKAHEIASKLENEVNQRHFLVGLFKGKSDLKTLL
AALK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggttaacacgctctttaaatactttacgtcaccaaaaacggagaagcgactt
gttaaagaaacgtccagtcctcaaagagattctcccaaatcgaatggcgatcaaaaagga
aaaggtacgcgtggtctgaaagcaggtaaagaaaattctaataacgaaaacaaaagggga
actccgaccagcagacacaaaaacaaatccttaagtgcggcaaccagaaaaagatcttcg
aacaaggaaacagaagacgatgagtccagtcgcccaaagagaagacgattggtaatacca
tctgacaacagtgatgattcaggagaggactacaaacctgctgcagacgatgctagttct
tccgaatattctgcgtctgaggctgatagtgagtctgaagctttatcatctggcatcgaa
agtgatgaagaaactcctaagaaaaaaaggaatgttgcgccgacaaaagctccaccgaaa
aaaaatggtcgtggaaaaacccagatgaaatctgaagtgaaaagctctgacccacccagt
caaacagctggtaatagttcagttaatgcccaaggctggactcatttgaaatatgacttc
cttcagacgaataaaattaaggatatacacagaaggcctccaagtgatccaaactacgat
ccaagaactctttacgtgccacatgaattcaaaataaatcagactcctgctatgaaacag
tggtgggaaatgaaatgtaagaatttcgactgtgtactctttttcaaagttggaaagttt
tatgagttgtatcacatggatgcagttaccggtgttaatgaacttggcctgtcatatatg
cgtggggaattcgcacattccggttttccagaaatagcatatagccgatttgcatcaagc
ctaatagagaagggatacaaagtagctcgagttgaacaaaccgaaaatccagagatgatg
tcagctagagtcagtaagatgtctcatgttacgaagtttgacaaagttgtgaaaagagag
atatgtcaaattagcagtaaaggtacgagagtattcactgctcaggatggtgaaacctct
acagccagttcaacttacttgctctcaatagtagagaaatttaatccatcaacacccaca
tcaatttatggtgtctgctttattgatacttcaattggaggttttcatcttggacaattt
gaagatgatcgtcatagttcaagactgttgacactagtttcccattttccaccgtcacag
gctatctatgaacgtggtggtatatcagagagaacaaacaaaatattgaataccatgctg
gctactgcacttaaggagccactgcaacgggagacgcaattttggtctgctgctactacc
ctcaaaaaactgcacgaaggagaatatttcaaatcagagttcaattccgattttacctgg
ccagaaggtttgaagccatatttaagtgatggagacagtctaggactcactgctgctgat
aatatggagctagctgtatctgcattggggggatgtgtatttcatttaaaagaatgtttc
atagatcagcagttacttgcccagggacgtttcgaatcttggatccctcctgatcatgag
gatcgccagagttcaggaaaactcgctaataatatggtactggatgccattacaataaat
aatctgagaatccttggaggacctggttcgctcatatcaacgctggatcattgttgcacc
ccatttggcaaacgtttgttacgcgaatggatttgccggccatcttgccgcaaatttgaa
ataatgcagcgacagcaagcagttaccgagctaattgataaaattgaaattacccaaaat
gttcgcggctcattagctccgctcccagatcttgagagattactgagcaagatacatgct
caaggtaattttgcaaaggggcaaagtcatccggatgcaagagctatcatgtatgaaagt
aagacgtattcgaaacgaagaatcctagacttcacaaacgcgcttcatggatttgaggaa
gcttcaaaaattatagattcaatcggtgacgttaaatgcgatctactaaaacggtgcatt
aaacacaatccagagggtgaatttcctaaattggaagagatgctaaattacttcaagagt
gcttttaatcaagaagaagcaaagaaagaagggtgtattataccgaaacctggcgtcgac
tcagagtatgatgcagttctcgaagaattgtcagaaataaaacgagacctagaaaaatac
ttggaagggcagagaaaacattttggagtaaaggtgaattattatggtactgagaaaaaa
cggtttcaaattgaagttcccgattcccagttgaggaaagttaccacagactatgaactt
cagtcacagcgcaaaggtttcaaacgctattacaccactaaagccaaagagcttttggaa
agacaaatgatcgcagaaactaacaaggataaagtacttaaagatataagcagaaggata
tttgctaaattcagcgaaaaatacgatgtatggtgttcggctgtctaccaattggctaca
ctagacgttctcactgcatttgctgaatattctcaaagcgccgagatgtctgttcctata
atagaagatgttacgagtgaaaaaagcgcttttattgacataagagatgggaggcatccg
tgcgttacatctgacgactttataccaaatgacactttattgggaacagaggattccgca
tcacttgtcattctaactgggcctaatatgggaggaaaatcaactctaatgcgtcaagtt
ggtctccttacaatcatggcccaaattggttgtcatattcccgcaagttcatgccgattg
acgttagtcgatcgtattttcactcgtttgggtgccaatgatgatatactaactggacaa
agtactttctttgtggagttgagcgaaactgcaactatactccagcacgcaacagcaaac
tcactggttctggtggatgaattaggccgaggcacctcaacttatgacggaacagcaatt
gcagcttcggttgtcggcgctctgaaggaacggacatgtcgcaccctattttcaacccac
tatcatgccttggtagaagactataaattggacaagaacgttagcctgagccacatggcg
tgtatggtagaaactgaagaggaagaggaggtttcacaagaaacagtgacgttcctgtac
aaactaagcaaaggtgcatgtccaaagtcttacgggttcaatgcagctcgtttggctgga
atttcatcaaaaatcactgtaaaagctcatgagatagccagcaagttagaaaacgaagtg
aatcagaggcacttcctcgttggtctatttaagggtaaaagtgacctgaaaaccctgctc
gcagctttaaagtaa
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