Diprion similis: 124408854
Help
Entry
124408854 CDS
T08947
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124408854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124408854
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124408854
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124408854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124408854
NCBI-ProteinID:
XP_046742059
LinkDB
All DBs
Position
8:20863664..20865576
Genome browser
AA seq
291 aa
AA seq
DB search
MANTLLSLAEKTFILHGVDDNYRTDGRNRSEYRPMEVETKVLPHTSGSARLRLANTDILV
GVKAEVDTPYPDNPNEGKLEFFVDCSANATPAFEGKGGDNLGTEISNTLTLAYQSSHVLD
LTTLCILPQQKCWKLYVDVLILQCDGNLFDAVALAVKAALYSAQIPKVTTATLDGGKADI
QLSDDPFDCVKLDVISFPVLVTLCKIGENCVVDPTSEEEECSAASIVVAVMPNGRITSVV
KTGYGSLQPSTLIKTLELAKDIGIRLNAGIMNALKEEDDLGSRREIFGFLK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatacattgttgagcttagcagaaaaaacatttatactacacggagtggatgat
aactaccgaactgatggcagaaacagatctgaatatcgcccaatggaagtggagacaaaa
gtcttacctcataccagtggttcagctcgtttacgcttagcaaatactgatattctagtc
ggtgttaaagccgaggttgacacaccctatcccgacaaccctaatgaaggaaaattggaa
ttctttgttgactgttctgccaatgctacaccggcattcgaaggcaaaggtggtgacaat
ttaggtacggaaataagcaatactctaacgttagcttaccagtcatctcatgttcttgat
ttgacaacattgtgcattttacctcagcaaaagtgctggaaattatatgttgatgtttta
attcttcaatgtgatggcaatttatttgatgctgtagcattagcggttaaggctgcattg
tacagtgcacaaatacccaaagttacaactgcaacactcgacggcggtaaagctgacatt
caattatcagacgatccattcgattgtgtcaagctggatgttattagttttcctgttctg
gttaccctatgcaaaataggagaaaattgtgtagttgatccaacttctgaggaggaagag
tgcagtgcagcaagtatagttgtcgctgtaatgcctaatggtcgtataacatctgtagta
aagacggggtatggcagtcttcaaccctcgacgttgattaaaacattagagctcgcgaaa
gacattggaattaggttgaatgcaggaattatgaatgcattgaaggaggaagacgatttg
ggttcacggagagaaatttttggatttcttaaataa
DBGET
integrated database retrieval system
