Diprion similis: 124409195
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Entry
124409195 CDS
T08947
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03013
Nucleocytoplasmic transport
dsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124409195
03015 mRNA surveillance pathway
124409195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124409195
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124409195
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124409195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
124409195
NCBI-ProteinID:
XP_046742605
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All DBs
Position
8:complement(26483555..26486966)
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AA seq
475 aa
AA seq
DB search
MATPKVDWAKYTDEQESLASKVTNLGISQPTTPPQEGSESSKSDETDDQISPAEKSLLQK
IIRKGLVETTKDIEIQRKDPTSPLYSIKTFEALHLKPALLKGVYAMGFNAPSKIQETALP
TLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDPNKDYPQVLCLSPTYELAIQTGEVAAK
MSQFCPEIKLKYAVRGEEIARGSKITNHIIIGTPGKVLDWAIKFRFFDLRKISVFVLDEA
DVMIATQGHQDQCIRIHKLLPRTCQMMFFSATYETAVMEFAEIIVSNPLIIRLLKEEESL
ENIKQYYVKCKNMDEKYTAITNIYGVITIGQAIIFCHTRKTASWLAEKMSKDGHAVAVLS
GDLTVEQRIAVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPVDQERQADCATYL
HRIGRTGRFGKSGIAINLVDSSHAMQVCQDIEKHFGKKIHYLDAEDAEEIEKIGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctacacctaaagtggactgggcgaaatataccgacgagcaagaaagcctcgcctcc
aaggtgacaaatttgggtatatctcaacctacaacaccaccacaagaaggaagcgaatcg
tcgaaaagcgatgaaactgatgatcagatatcacctgcagaaaaatcattgctgcagaag
attatcagaaaagggctagttgagaccactaaggatatagagattcaacgaaaagatccc
acatcccctttgtacagcattaagaccttcgaagcactccatttgaagccagcactcttg
aaaggagtttatgcaatggggttcaatgcgccttcaaaaattcaggagactgctcttcca
accctacttgcagatccaccacaaaatatgattgcgcaatcgcagtctggtaccggaaag
actgcagcctttgttttagctatgctgagccgagtagaccccaacaaggactatccccaa
gttctttgtctatcacctacgtacgaattggccattcaaacgggcgaagttgcggcaaaa
atgtctcaattttgtccagaaattaagctgaaatatgctgttcgaggagaagaaattgct
cgaggatcgaaaatcactaaccatataataattggaactccaggaaaagttctggattgg
gctataaagttcagattttttgatctgagaaaaatctcggtctttgttttggatgaggca
gatgtaatgattgccactcaaggacaccaggatcagtgcatacggatccacaagttgttg
cctcgtacttgtcagatgatgtttttttctgcaacgtatgaaacggcagtgatggaattt
gctgagataatcgtgagcaatccgttgataatacgtttgctaaaagaggaggaaagtttg
gagaacatcaaacagtactacgtcaagtgcaagaacatggatgaaaagtacacagctatc
accaatatttatggcgtgatcaccattggacaagctatcattttctgtcatacaagaaaa
acagccagctggctagcagaaaagatgagcaaagacggtcacgctgtggcagttttatct
ggtgacctgaccgtcgagcaacgcattgctgttttagacagatttcgagcaggtcttgaa
aaggtcttaattaccacaaatgtcttggctcgaggaattgatgtcgagcaagtaacaatc
gttgtgaacttcgacctgccagttgaccaagaacggcaagcagattgtgcaacttatctg
cacaggatcgggcgaacgggcagatttggaaaatctggtatcgctatcaatctagtcgat
tcatcgcatgcgatgcaagtctgtcaagatatagaaaaacatttcgggaagaagatacac
tatctcgatgcagaagatgcggaggagattgaaaaaatcggcgcataa
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