Diprion similis: 124409462
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Entry
124409462 CDS
T08947
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
dsm
Diprion similis
Pathway
dsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124409462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124409462
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124409462
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
124409462
NCBI-ProteinID:
XP_046743030
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Position
8:complement(14256639..14264198)
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AA seq
713 aa
AA seq
DB search
MSGEKSEFDWGNEKLQRAQKTIEESPYDLEAWSILIREAQNRPITEVRPVFEKLVNVFPS
AGRYWKIYIEQEMKMRNFEKVEKLFQRCLMKILNIELWKLYLSYVKETKASLASYKEKMA
QAYDFALDKIGMDIHSYSIWNDYVTFLKSVEAVGSYAENQKISAVRKVYQRGVINPMINM
EQLWKDYMAFEQNINPIIAEKMAIERSRDYMNARRVAKELEAVTRGLNRSAPSVPPTGHS
EEVKQVELWKKYIAWERSNPLRTEDTSLVARRVMFAIEQCLLCLGHHPAVWHQAAHFLEL
SSKILTEKGDVNAAKNLSDEAATMFERATNTLLSKNMLLYFAHADFEEGRVKYEKVHQIY
QKFLDIPDIDPTLAYVQYMKFARRAEGIKSARIVFKRAREDARCAHQVYVAAALMEYYCT
KDKNIAFRIFELGLKKFSDNPEYILCYIDYLSHLNEDNNTRVLFERVLSSGSLEPEKSVD
IWNRFLEFESNIGDLASIVKVEKRRSAVLEKIKEFEGKETAQLVDRYKFLNLYPCTPIEL
KSIGYMEVSNVVRNNSGIVPRVTDPEESMASLPRPDLSQMIPYKPKVNALAGEHPVPGGT
FPLPPAAAQLCTMLPPPGCFRGPFVAVDLLVDVFSRIQLPEHAPLPVADNGCDTKLFDLA
KSVHWIVDESNDGTQIGSKRRRTRLGGDDSEDDDLPPPPANDIYRQRQQKRVK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaaaaatcggaatttgattggggaaatgaaaaacttcaacgggctcagaaa
accattgaggaatcgccgtacgacttagaagcatggagtatattaatcagggaggctcaa
aacagacctatcaccgaagtgagacccgtatttgaaaaacttgtgaacgtgttcccatca
gctggccgttactggaaaatatatattgagcaagagatgaaaatgcgcaactttgagaag
gtggaaaagcttttccaaagatgtcttatgaaaatcttaaatattgagttatggaaactc
tacctttcttacgtcaaagaaacaaaagcaagtcttgcttcgtacaaggagaaaatggca
caggcatacgattttgcattggacaaaattgggatggatatccattcttacagtatttgg
aacgattatgtcacttttttgaaaagtgttgaagctgtcggttcttacgcagaaaatcaa
aagattagtgctgtgcgaaaggtatatcaacgcggtgttataaatccaatgattaatatg
gaacagttatggaaagactatatggcgtttgagcaaaacatcaatcccataattgctgaa
aaaatggctattgaaagatctagagactacatgaacgcgagacgagtggctaaggagctg
gaagcagtaacgaggggcttaaatagaagtgctcctagtgtcccaccaacaggtcactct
gaagaagttaagcaggttgaattgtggaagaaatacattgcctgggagcgcagcaatcca
ttgcgaacagaggatacgtcgcttgttgctcgtcgagtgatgtttgcgattgagcagtgc
cttctgtgtcttgggcatcatcctgcggtctggcatcaagctgcacactttttggagcta
agctcaaagattctaactgaaaagggtgacgtgaatgcagctaaaaacctgagcgacgag
gctgcaacaatgttcgaaagagccacaaatactttgctttcaaaaaatatgctactttat
tttgctcatgctgatttcgaagaaggacgagtcaagtatgaaaaagtccatcaaatctat
cagaagttcctagatattccagacatcgatcccactttggcgtacgtccaatacatgaaa
tttgcgagacgtgctgaagggattaaatcagctaggatagttttcaaaagagctagagaa
gatgctagatgtgcacatcaggtttatgttgcggccgcgttgatggagtactactgcacg
aaagacaagaatatagcttttagaatctttgagttaggtctaaaaaaattcagcgacaac
cctgaatatatcttgtgctacatagattatctttctcatttgaatgaggacaataacacg
agggtactttttgagagggtattgtcgtcaggtagtctggagccagaaaaatctgttgat
atttggaatagatttcttgagtttgaatctaacattggtgacttggccagtattgtgaaa
gttgaaaaacggcgaagcgcagtattagaaaagataaaagaatttgaagggaaggagact
gctcagttggtagacaggtataagttcctcaatctgtatccttgtacaccaatagaattg
aaatctatcggttacatggaggtatccaatgtagtaaggaacaattctggcatagtacct
agggtaaccgaccctgaagagtctatggcgtctctgccaagaccagatttgtcacaaatg
ataccttataaaccaaaagtaaatgccctagcgggtgaacatccagtaccaggcggcact
ttcccgttacctccagctgctgctcaactatgtacaatgcttccaccgcccggatgcttc
cgaggaccatttgttgcagtcgatttgcttgtcgatgtttttagtagaatccaattacca
gagcacgctccacttcctgtagcagacaatggatgcgataccaagctttttgatcttgcg
aaatctgtgcactggatagtcgatgaaagtaacgacggtacacagattgggtcgaaacgt
cggagaacccgtttgggtggtgatgatagcgaagacgacgatctgcctccaccaccagca
aacgatatttatcgccagagacagcaaaagcgagtgaaatga
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