Diprion similis: 124409648
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Entry
124409648 CDS
T08947
Name
(RefSeq) uncharacterized protein LOC124409648 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
dsm
Diprion similis
Pathway
dsm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124409648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124409648
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124409648
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
124409648
NCBI-ProteinID:
XP_046743358
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All DBs
Position
8:complement(25158495..25167513)
Genome browser
AA seq
1085 aa
AA seq
DB search
MSVNAQFANPPPVISLPNMSVPPPIATPNLSAPPPNLTTINTTTGGYQHRFGTHRDGNRG
FFKPFRPYHAPKVIAGGQDALQDEFDGKRLRKSVMRKTVDYNAAIIKTLENRVWQRDYRD
RRALQPDVIYYPDLLPPPSYVDNPINAVTTKFVKTATNKMRCPIFCMAWTPEGRRLVTGA
SSGEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMF
QAHKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSL
VISGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLR
NLSQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIV
WTLAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGAAGVDDHEVADDSPV
IPGMGPEDRINADGESEDKSGGIPGLDLDHAIDEGKKCASKKVPYSKPIPRNFQAQWNEM
EAEDIEQVEALNAFVNQLIETTPGAVPLNEVTPNAIILYGKMIPVEPDSKLAEAITKGND
AINKLVFSGEIEELREVIGSPEDVEESEDFLQDEGEIDYSKVPEIELPAPLPSSKFAQNP
ELLKTLNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGASLNDDLSSDTESRSGMANNSG
CESNSFGMGLDEDLRHLPSDMRSMGRDEDLRFGGMGGGLGRSMMGSDQDLRSSSMNFGDK
DFRQMSMHNFGMGKSNMDNDMFGDRDRESRDRSRWDDEQGGRNLNDNFNMDFPGNNNFDK
RDNMPPNMGNNHNMPHMGNMSNHHNMQNINPNMSHHMSNMGPHPNMPPHMGMPNKNNPNM
SSHQGMQNIDNPMPHMNNSNMPNMMHHPNMSNMPPGFGPNGMPPGNFGPNFRPPNGNFGG
NQHFRPNPMAPFAPNSGPPFNNSFMQNQGPPNLRGPNAGNQGPPNFDRPGFGGPNFRGPN
PGNQGPGGYGGYGGPNKNGPMHNMQGRSRGSNENNIGRGAYGNRGRGRDNDQPPRGGNSR
GRDNF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcaacgctcaattcgccaatccacccccggtgataagtctaccgaacatgtcg
gttccacctccaattgcaacaccaaatttatccgcacctcctcccaatttaacgactata
aacactacgaccggcggctatcagcacagatttggtactcacagagatggcaatcgtgga
tttttcaaaccatttcgaccttatcatgccccaaaagttatagccggtggtcaagatgca
ttacaagatgaattcgatggaaaaagactcaggaaatctgtgatgcgaaagacggtcgac
tataatgctgctattattaaaactttagagaatcgtgtttggcagcgagactacagagac
agaagagctcttcagcctgatgtcatatattatccggatcttctaccaccaccaagctac
gttgataatcccattaacgcagtgacaacaaaatttgtcaaaacagcaacgaataaaatg
aggtgtccaatattttgcatggcttggaccccggaaggaaggaggcttgtcaccggtgca
tcgagtggcgaattcacattatggaacgggcttacttttaactttgaaactattctacag
gctcatgacagccctgtacgtacaatggtttggtctcacaacgaaagctggatggtgacg
ggtgaccacgcaggctacgtaaagtactggcagagcaacatgaacaacgtcaagatgttt
caggcgcacaaagaggctattagaggactcagtttcagtcctacggatcacaagctggcc
acttgcagtgatgatggaactgtcagaatctgggacttccttcggtgtcacgaggaacga
attctcaggggtcatggagcggatgtaaagtgcgttcattggcatccgcagaagagtctc
gttatatctggcagtaaggataatcagcaaccagtgaagttgtgggatccgaaaaccggg
caatcgctagctactctacatgcgcacaaatctacggtgatggatgtgaagtggaacgag
aatggaaactggctagtcaccgcctctcgggatcacttactcaagctgtttgatctgcga
aatcttagtcaagaagttcaaacctttaggggtcataaaaaagaagcttcaagcgtcgct
tggcatcctagtcatgaaggacttttttgtagtggtggtagtgacggggccatactcttc
tggcacgttggggctgacaaagaagttggagcaatagagcaagctcacgatagtattgta
tggacattggcgtggcatccgcttggtcacatattatgttctggaagcaacgatcacaca
tcaaagttctggacgagaaataggcctggagatttgatgagagataaatacaacctgaac
actctgccggcaggagctgcaggtgttgatgatcatgaagttgctgacgactcgccagtt
ataccaggtatgggacctgaagatagaattaatgctgacggtgaatctgaggataaaagc
gggggaatcccgggtcttgacttagaccacgccatcgatgagggaaagaaatgtgccagt
aaaaaagttccttatagtaaaccgatacccagaaacttccaagcgcagtggaatgaaatg
gaagctgaagatattgaacaagtcgaggccttgaatgctttcgtcaatcagcttatcgaa
acaacacctggggctgtacctttgaacgaagttacacccaacgctataattttatatgga
aaaatgattccagttgagccagattcaaaattagctgaggctattaccaaaggaaatgac
gccataaacaaattagtattttccggagagatagaggagcttcgcgaagtgatcggttcg
cctgaagatgtggaagaatccgaagatttcttacaggacgagggtgaaattgattactcc
aaagttcctgaaatcgaacttcctgcaccgttgcccagttccaaatttgcgcaaaatcca
gaactattgaaaacattaaaccgcggtggaaagagaaagtttgatcagttaattggctgg
agtgacggtggtgcgagcgaccgaacgtctaaaatacaccaacctgtcttcggagcttca
ctaaacgatgacttatccagtgatacagagtcgagatctggaatggctaacaattcaggc
tgtgaaagtaactcttttggaatgggtctggacgaagatttgagacacttgccaagtgac
atgcgaagcatgggtagagatgaagatttacgattcggtggtatgggtggtgggctgggc
aggtcgatgatgggtagcgatcaggacttaagaagcagttcgatgaactttggcgataaa
gatttcaggcaaatgtccatgcacaatttcggaatgggaaaatcaaacatggacaatgac
atgtttggggacagagacagagaaagcagagacagatcaagatgggatgacgagcagggt
ggtagaaatcttaacgacaacttcaacatggatttccctgggaataacaatttcgacaag
cgagacaacatgccgccaaatatgggaaataatcacaacatgccgcacatgggtaacatg
tccaaccatcataacatgcaaaatatcaatccaaacatgagtcatcatatgtcgaatatg
ggaccccatccaaacatgccgccacacatgggtatgccaaataaaaataatccaaatatg
tcctcgcatcaaggaatgcagaatattgataatccaatgccacatatgaataactctaac
atgccaaacatgatgcaccaccccaacatgtctaatatgccacctgggtttgggccaaat
ggaatgcctccaggcaatttcggccccaatttcagacctcccaacggaaactttgggggt
aatcaacacttcagaccgaatcctatggcgccctttgcgccaaattctggcccacccttc
aacaactcgtttatgcaaaaccaagggccaccaaatttgcgtggccccaatgctgggaac
caaggaccaccaaactttgatcgcccaggtttcggtggcccgaatttccgtggtccgaat
cctggtaatcagggaccaggcgggtatggcggatatggtgggccgaacaaaaacggacct
atgcataacatgcaaggaagatccagaggctctaacgaaaacaatatcggacgtggtgca
tacgggaatcgaggcaggggtagagacaatgatcagccacctagaggtggcaattctaga
ggcagagacaatttttga
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