Diprion similis: 124409841
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Entry
124409841 CDS
T08947
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124409841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124409841
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
124409841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
124409841
NCBI-ProteinID:
XP_046743695
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Position
8:22766612..22782042
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AA seq
910 aa
AA seq
DB search
MSTDTSFEPGHKSSNDSDSPQNESANAQGVEVIEILPGFTNFDDFVNAGFEALKTGIKAA
NGLPSGEKYDYYKCFPTFRDIINGEINNVLGCMQNITEGVGVRGNIRRRDIEEKFELLIE
ANDILLERAGICMDEASGILRNPDVEFVVSQSNSTAVSGSWNNLSLHSKSQQSQPMNKAK
AICLLTAKNIQRPQLKFEDKIDNSPKPFQPRIKDKPNSLKPLVLYVEEDEDGEFFSHPYE
FELDRFEAPEYQLESRVPVEYKHIDDTSLVVIEKPEDIKILLDDLSKYTEIAVDVEHHSY
RSFQGITCLMQISTKDTDYLVDTLSLRSELYQLNEIFTKPSILKVFHGASSDIEWLQRDL
SLYIVNMFDTHIAAKQLNLPYLSLAHLMKRYCNIDPNKHFQLADWRVRPLPEELMKYARE
DTHYLLYIKDNLTNALLEQANGQSNILKAVYDRSTDICKKTYRKPVWSEESCMNLYRKSK
KMFNNRQLYALRELHKWRDATGRAEDDSTGYVLPNHMLLNIAESLPREMQGILACCNPIP
PLVRQNSLSLHKIILKAKEQPMIKPILEDDIRQRMTQRNQVTDSETALLYSPHDMPHDME
IRADLPCLLDPNSSSKINITHQTVPHTVTVFDSPPQSEDEDTVGHITRKKKRRTPFISPF
ERYKRVLPMVAAEEAKERERREKEEAERIKLVENNENEITESKNRVYQHFKDVVEVVTNP
VSVQQPAGSSSNQSIDSKQLGPDHKTLSQMQGRKRKRQSNYHDDTKIPESQDDLSTPIPF
LHKKLTQNYRRDKRELNSPKQSVKKQKTSFRDTGHSSFTDDRELSANTELSVKSLRNNKK
RSKQENNRNMKEKGILPRESFDYKNVDFSSFQGGSRTQNQIPFQAQNKKKNARGNRGKGN
RGSKKQKWNC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacacgagttttgagcctggtcataaatctagtaatgattctgactctcca
cagaatgaatcggcaaatgctcagggtgtggaggtcatcgaaatcctgccaggatttaca
aatttcgatgatttcgttaatgctggattcgaggcactaaaaaccggcataaaagccgct
aacggcttacccagtggtgaaaaatatgactactacaaatgttttccaacctttcgtgat
atcattaatggcgagataaacaacgtcttgggctgtatgcaaaacattacagaaggtgtc
ggagtgagaggcaatatcagacggcgtgatatagaagaaaagtttgagcttttaattgaa
gctaatgatattttattagagcgagcgggaatatgcatggatgaggcatccggaattctg
cgaaacccagacgttgaatttgttgtatcgcagagcaactcaacagctgtaagcggtagt
tggaataacttatctttgcattcaaaatctcagcaatctcaaccgatgaataaggctaaa
gcgatttgtttactcacggcaaagaatattcagcgaccacagttgaagtttgaagataaa
attgataacagccctaaacctttccaacctagaataaaggataaaccaaactcgttaaag
ccactggtgctttatgtcgaagaagatgaggacggagaattcttcagccatccatacgaa
tttgaacttgataggtttgaggcacctgagtatcaactggagtctcgtgttcctgttgaa
tataaacatatagatgacacttctttagtcgtgattgaaaaacctgaagatataaaaata
ctattagatgatttaagtaaatacactgagattgcagttgacgtggagcatcattcatat
agatcattccaaggtataacatgcctgatgcaaatatcaaccaaagatacggactatctt
gtcgatacattgtcacttagatctgagctgtaccagcttaatgagatatttaccaaaccg
tccattcttaaggtatttcacggcgctagcagtgatatcgagtggctgcaaagagatttg
tctttgtacattgtaaatatgtttgatactcatattgcggccaaacagcttaatttgccg
tacctaagtttggcacatcttatgaagcgttactgtaatattgatccaaacaaacatttc
caactggccgactggcgagtcaggcctcttcctgaggagctgatgaaatatgcgagggaa
gatacccactacttgttgtatattaaagataacttaacaaatgcattgctagaacaggcc
aatgggcaaagcaatatcttgaaagcagtctacgaccgaagtacagacatatgcaaaaag
acgtacagaaaaccagtttggtcagaggaaagttgtatgaatttgtatcgaaagagcaag
aaaatgttcaataacagacaattgtacgctcttagagaactgcataagtggcgagatgct
actggtagggcagaggacgacagtactggttacgttctaccaaatcatatgttattgaac
atcgctgagagtttgccccgtgaaatgcaggggattctggcatgttgtaatccaataccg
cctctggtcagacaaaactcgttatcgcttcataaaataatcttaaaagccaaggaacag
ccgatgataaaacccatcctagaagatgatatccgacaacgtatgacacaacgaaatcaa
gtcacagattcagaaactgcacttctgtattcgcctcatgatatgccacatgatatggag
atcagagccgatttaccttgtttattggacccaaatagctcatccaaaattaatattact
catcaaacggttcctcatactgtcactgtatttgacagccccccacaatcagaggatgaa
gacaccgtggggcacataacgaggaaaaaaaagagacgaacgccattcatcagtcctttt
gagcggtataagcgtgtattgcccatggtggctgcagaagaagcgaaagaaagagagaga
cgagaaaaagaagaagctgaaagaataaaattggtagaaaataatgaaaacgaaataaca
gagagtaagaacagagtttaccaacacttcaaagatgtcgttgaagtagttaccaatcca
gtcagtgtacagcaaccggctggtagcagttcgaatcaatctattgattctaaacagttg
ggacctgaccacaaaactttgagccagatgcagggcagaaagcgtaaacgacaatctaat
tatcatgatgatactaaaattccagagtcgcaagatgatttgtcaacaccgatacctttc
ctgcataaaaagctcacgcaaaattatagacgagataaacgagaattgaattcacccaaa
cagagtgtaaagaagcaaaaaacctcattccgcgatacagggcatagttcattcactgat
gatagggaactttctgcaaatacagaattgtctgttaaatcacttagaaacaacaagaaa
aggagtaaacaggaaaataataggaatatgaaagagaaaggcattctacctagagaatca
tttgactacaaaaatgtcgatttcagtagttttcaaggaggcagccgtacgcagaaccag
attcccttccaagctcagaacaagaaaaagaatgcacgaggaaaccgaggaaaaggaaac
agaggtagtaagaagcaaaaatggaactgctaa
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