Diprion similis: 124410403
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Entry
124410403 CDS
T08947
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
dsm
Diprion similis
Pathway
dsm03030
DNA replication
dsm03410
Base excision repair
dsm03420
Nucleotide excision repair
dsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124410403
03410 Base excision repair
124410403
03420 Nucleotide excision repair
124410403
03430 Mismatch repair
124410403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsm03032
]
124410403
03036 Chromosome and associated proteins [BR:
dsm03036
]
124410403
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124410403
DNA replication proteins [BR:
dsm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124410403
DNA Replication Termination Factors
ELG1-RFC complex
124410403
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124410403
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124410403
Check point factors
HRAD17(Rad24)-RFC complex
124410403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
AAA_14
nSTAND_NTPase5
AAA_16
Mg_chelatase
Rad17
AAA_11
Viral_helicase1
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
AAA_24
AAA_18
MeaB
DNAX_ATPase_lid
ABC_tran
AAA_5
IstB_IS21
MipZ
AAA_29
NTPase_1
RNA_helicase
AAA_28
AAA_23
AAA_25
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124410403
NCBI-ProteinID:
XP_046744692
LinkDB
All DBs
Position
9:complement(2645305..2647523)
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AA seq
350 aa
AA seq
DB search
MAGADENDEPMEVEVVPSTSGLNQKSKSSYRASHLPWVEKYRPQVFSDIVGNEDTVARLS
VFAQNGNAPNIIIAGPPGVGKTTTILCLARVLLGPAFKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPQGRHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQVLAKIIQVCEKENVSYTDDGLEAIVFTAQGDMRQALNNLQSTHN
GFGHVNGENVFKVCDEPHPLLVKEMLELCSKGNIDKSFGVMSHLWRMGYSAEDIIGNIFR
VCKNLDIDEKMKLDFIKEIGLTHLGIVNGMNSLLQMQSLLARLCRIALKK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctggagccgacgaaaatgacgagccgatggaggtcgaggtcgtgccgtcaaccagc
ggcttgaatcagaagagtaaatcgagttacagagcctcgcatttgccgtgggtggaaaag
tatcgtccccaagtgttttcagacatagtgggcaacgaggacacggttgcgcggttgtct
gtttttgcccagaacggaaatgcgccgaatataatcatcgctgggccgcctggagtggga
aagacaacgaccatcctctgtctagctcgagttcttctcgggccagctttcaaggatgcc
gttcttgagctcaacgcgtccaatgacagaggaatcgacgtcgtacgaaacaagatcaag
atgttcgctcaacaaaaggtcacccttcctcaaggcaggcacaagataatcatactcgac
gaagcggacagcatgaccgatggcgctcaacaagccctacgccgaaccatggagatctac
agcaacacgaccaggttcgcactcgcctgtaacaacagtgagaaaatcatcgaacccata
cagtcacgatgcgctatgttgcggtatggaaaactgtccgacgcccaagtcttggccaaa
atcattcaagtctgcgaaaaagagaatgtatcttacactgacgatggattggaagcaatt
gtgttcactgctcaaggagacatgcgacaagcgttgaacaatctgcagtcgactcacaac
gggtttggacatgtgaatggagaaaatgtgtttaaagtgtgcgacgaaccgcatcccctt
ctcgttaaagaaatgcttgaattatgctcaaagggaaacatcgataaatcgtttggggta
atgtcgcatttatggaggatgggatactccgctgaggatattattggaaacatattcaga
gtctgcaaaaatctcgatatagatgagaaaatgaagcttgatttcatcaaggaaatcggt
ttaacgcatttaggcatcgttaatggaatgaacagtctgcttcaaatgcagagtcttttg
gcccgcctgtgccgaatagctcttaaaaagtaa
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