Diprion similis: 124410619
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Entry
124410619 CDS
T08947
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
dsm
Diprion similis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124410619
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
124410619
3'-5' decay
Other 3'-5' decay factors
124410619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
PhoH
PAM2
Motif
Other DBs
NCBI-GeneID:
124410619
NCBI-ProteinID:
XP_046745077
LinkDB
All DBs
Position
1:complement(11613236..11618892)
Genome browser
AA seq
926 aa
AA seq
DB search
MICSPSKCDEVMFVQNILPNFSKLVETRWFTSDNPESVMSDAVENVVVFVDGNLNLRFCS
KCTHHVWTFEVLTIGKSLENVSLMLDNHREHFTILSVKSASGNSGLCNGQEWFKASAALP
GLDLNYSSTNRYKITIGFKTDRYGTYRQTVIFGFGGYPVLAKQVSVDCIPIADVPRIEEA
RRIILSQNVRKWTKSNSLIVAFESPFVPAKDIKEVNLTKAYPFPDETNFYLTHDTLTEES
LTPTNYRGRMHELVSIEELARHEQVARYNIVTQLRLCQYYIVAPDADCATTAKYAPSGEL
FAQLPLGREISEDSKSGRLLLRGCNRVLFKPVDWERSDNQPQIVFEAHIEDKCNRIIYLR
LSKHCIETLQLQPDTDVTVQVQFQLNRLPYCEWHRSIDRVIDTSLIFPTVSEDTVIPWDS
KEYWSAQFDQKLNVKQKQAVMAMIAPINIILPPILLVGPFGTGKTYTLAQGIRMILNKGP
EHKVLLCTHSNSAADLYVKDFFDAWYKETMDIRMKPLRIYYKGRFRNTVHPVVQEYCLMD
ENGRFREPTKDDVLRCGLIIATLATSSCLASLDCGLTHIIVDEAAQAMECEALTALTLAR
STTRLILAGDQMQLAPELYSDLANERGLGLSLLERICNLYPPIFPCKILLCQNYRAHSTI
IGLTSELFYSGQVVGCGKHLAHPIFNPLTFFSVQGQDIQGMHSTGFYNDAEAFEVTDRIA
ELKSCWPTEQWGPYGEGAIGVVAHYAEQVSRIRMELRKRKLFDISVERVMNVQGKQFRAV
FISTVRTRNSCQYSTDVNIRDFGFLSNPRLLNTSITRAKCLVAIIGDPVALLTIGSCQRV
WEKFFSAATLYGIDYVTLRRYVDNLPQTPQSAPLNPLAKEFIPRSPQPRYQVEYVPIPVP
YPVIYCNSNNTQPTTKKNSSLDLIQK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgatttgttcaccgagtaagtgcgacgaggttatgttcgtccagaatatattgccaaac
ttttcgaagctcgtggagacgcgatggttcacctcggacaatccggagtctgtgatgtcc
gacgcggtcgaaaacgtcgtcgttttcgtcgacggtaatctgaacctaagattttgctcc
aaatgcacccatcatgtctggacgtttgaggtactgacgataggcaagtctctggagaac
gtttcgctgatgctcgacaaccatcgagagcactttaccattctatcggtgaaaagcgcc
agtggtaacagcggtttatgcaacgggcaagagtggtttaaggcctcagccgcgctcccc
ggcttggatctcaactactcgagcaccaaccgctacaaaataaccatcggatttaagaca
gaccgttacggcacgtacagacagaccgttatattcggattcggtggctatccggttctg
gctaagcaggtttcggtcgattgcattcccatcgccgacgtaccgcgcatcgaggaagcc
aggagaataattcttagccagaacgtgcgcaagtggactaaaagcaactccctgatagtc
gcctttgaatcaccctttgtcccagccaaagacatcaaggaagtaaatctgaccaaggcc
tatccctttccggacgaaactaacttctatctcacccacgacacactcaccgaagaatct
ctcactcctacaaactatcgtggacgcatgcacgaacttgtctccattgaagaactggcc
agacacgaacaagtcgccaggtacaacattgttacccagctaagactctgccagtattac
atcgtcgcccctgacgccgactgcgccactactgctaaatatgctccatcgggtgaactc
tttgctcagctgccgcttggccgagagatatccgaggattcgaaaagcggccgattgttg
cttaggggttgcaatagagtgttattcaagccagttgattgggagagaagtgacaaccag
ccgcaaatagtctttgaagcgcacatcgaagacaaatgcaatcgaataatttacttgagg
ttgtcaaagcattgcatagaaacgcttcagcttcagccagacacggatgttacggttcaa
gtacaattccagctaaatcgattgccgtattgcgagtggcatagatccatagatcgtgtt
atcgataccagcctgattttcccaaccgtatcggaggacaccgtcataccctgggactcg
aaagagtactggagcgctcagtttgaccagaaattaaacgtcaaacagaagcaagccgtc
atggctatgattgcccccattaacatcatcctaccgccgattctgcttgtcggacccttt
ggaactggtaaaacttacacactagcccaaggaatacgcatgattttgaataagggccct
gaacacaaggtattgctttgcacgcacagcaacagtgccgcggatttatatgttaaggac
ttctttgacgcatggtacaaagaaacaatggacatccggatgaaacctcttcgaatctat
tacaaaggacgatttagaaacacggtacacccagtagtccaggaatattgtctgatggat
gaaaatggccggtttcgagagcccacaaaggacgatgttcttagatgcggtttgattatc
gctacgcttgcaacgtctagctgtctggcaagtctggattgcggtctgacacacataata
gtggatgaggctgcgcaagctatggaatgcgaggcattgactgccctgacgctggctaga
agtacaactcgtttgatattagctggggaccaaatgcaattggcgcctgagttgtacagc
gatcttgccaatgaacgaggactgggacttagtctgctagagaggatttgcaatctttat
cctccgatcttcccctgcaaaattttactatgtcaaaactacagggctcactctacaatc
atcggactaacttctgagcttttctattctggccaggttgttggctgtgggaaacacttg
gcacacccgattttcaatcctttaacattcttcagtgttcaaggccaagatattcaggga
atgcattcgactggattttacaacgatgcggaggcgtttgaggtgacggatcgaatagca
gaattgaagagttgttggccgacggagcagtggggaccttacggagaaggggcaataggg
gttgtagcgcattacgcagagcaagtgtcaaggatccgtatggagttgcgtaaacgtaag
ctatttgatatttcggtggaacgagttatgaatgtacagggaaaacagtttcgagctgta
tttataagcacagttaggacgcgcaatagttgtcagtattcaaccgatgtgaatattaga
gacttcggttttttgagtaatccgagactcctgaatacttctatcactcgggcgaagtgt
ctcgtagccataataggagatcccgtggcactgctgaccataggatcttgccaaagagtt
tgggaaaagtttttctccgcagcaacattgtacggcattgattatgtcactcttagaagg
tacgttgacaatttaccgcaaacaccgcaatctgcacctttgaatcctttagctaaagaa
tttataccaaggagtccgcagcctcgttatcaagtagagtatgtacctataccggtacca
tatccagtgatttattgtaattcaaataacacgcaaccgacgactaagaaaaattcgtcg
ttagacctaatacaaaaatag
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