Diprion similis: 124410686
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Entry
124410686 CDS
T08947
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
dsm
Diprion similis
Pathway
dsm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124410686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124410686
03041 Spliceosome [BR:
dsm03041
]
124410686
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124410686
Spliceosome [BR:
dsm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124410686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
VPS38
Motif
Other DBs
NCBI-GeneID:
124410686
NCBI-ProteinID:
XP_046745206
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Position
9:1593535..1596804
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AA seq
668 aa
AA seq
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MGKENETESSKKRRKSVTTGAATPVKDADMYKTITTYEEKEAMDRSPATDSENFLSMCEN
IRTLMDKIAKLKVNSDESAKEEIRELQIQTSLAFIELKKLNRMEKFRTKFARDSLVAAKS
SVDSRHLHLQNLLYEVMHLKKEVIKCLQFKSKDESIELVPEDEFYKEAPESVSRPEVTKT
DPHQLRLARLEWELMQRKQLAALCDELTDSKKGVAASIESKQTRLDNLAPQLRTILEASK
PLQESLGLPLDKIRQEHQKAALLASPLYVLYAKATAYRDAYDSSLLVSIEGDDDDAKRVN
SQEGSQDSDSDQDNQTDGVVEETPVHKKRHHRMSKEARQEEKKLRLLQRHPLSVRLVMVF
KSNTKLTLNFFYMSYLNVVTLEATLDTENPGGVSAGDMLVSDSVLRELFPGDLGLESPNP
ANHYQLCRYGLGPFPSLQLGIPYNWAQRMAGLRFITSDNAKQKVAVNHGLAQDSVECVLK
EIKRRVKARLELCSEIRQLESGNLPIFNDSSDPMPCKIATVLHKFNTLSWKSYSSFEDTP
PFCQKGLVSAMDIFYEAVLRRESSELVAHIAIKPDYPRVAPIFSVTLNPIVPASVDILRD
IEREINVMWEKPPTLSAQLQRLRACFDIYLETEGIAPQEKIFFHPVRGRTRARPYKYLTL
GGGIFTHR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaatgaaactgagtcctcaaagaagcgaagaaagtccgtgactactggg
gctgcgactccagtcaaggacgccgatatgtacaagacaataacaacttacgaagaaaag
gaggcaatggatcgatcgcctgcgacggattcagagaattttttatcgatgtgcgaaaat
attcgaacattgatggataagatagcgaaattgaaagtaaacagcgacgaaagtgcaaaa
gaagagattcgagaactgcagattcaaacatcactagcattcattgaattgaaaaagttg
aatagaatggaaaagttcagaacaaagtttgccagggactctttagtcgcagctaagagc
agtgtagatagcaggcatctgcatttacaaaatttactctacgaggtcatgcacctcaag
aaagaagtcatcaaatgcttgcaattcaaatcaaaagacgaatctatcgaacttgttcca
gaggatgaattttataaggaagcacctgagtctgtctccaggccagaagttacgaaaacc
gaccctcaccaactgcgtctagctcgtttggagtgggagttgatgcagcggaaacagctg
gccgcattatgtgacgagcttactgacagcaagaaaggagtggctgccagtatagaatcc
aaacaaacgcggttggataatcttgcaccacaattacgtacaattttggaggcaagcaaa
ccacttcaggaaagcctcggcctaccattagataaaatacggcaagagcatcaaaaggct
gccttattagcctcacctttgtatgttctttatgcaaaggccactgcgtatcgagatgca
tatgactcctcactgctcgtgagtatagaaggagatgacgatgacgccaagagggtcaac
agccaagaggggtctcaagactcagactctgaccaagacaatcaaacagatggggttgta
gaagaaacaccagtccataaaaagagacaccacagaatgtcgaaggaagctaggcaagaa
gaaaagaaacttagattattgcagagacatccattgagcgtaagactcgtaatggttttc
aaaagtaacaccaagttgacactgaacttcttttatatgagctacttgaatgtggtgacg
ttagaagccacactggacaccgaaaatcccggtggcgttagtgcaggggacatgttggtg
tctgattcggtactccgagagttattccctggtgatttgggtctggagagcccaaatcca
gctaatcattaccagctatgtcggtatggtttgggcccttttccgtcgctgcaattaggc
attccatataactgggctcagcgcatggctgggctgcgtttcattacgtcggataatgct
aaacagaaggtcgcagttaaccacggattggcacaggacagtgtggaatgcgttcttaaa
gagataaaacgacgtgtgaaagcgcgacttgagctctgctctgaaatacgccagttggaa
tcagggaatcttcctatttttaacgatagtagtgatccaatgccatgcaagatagccact
gtgctacacaagttcaacactctctcctggaagagttactcaagctttgaagatactccc
ccgttctgtcaaaaaggtcttgtatcggcgatggacattttctatgaagctgtactacgc
agagagagcagtgaacttgtcgcacatatagccatcaaacctgactatccacgagtagca
ccaatcttcagcgtaactctcaatcctatcgtaccagcatccgttgatatcttgagggat
attgagcgagaaataaatgtcatgtgggaaaagcctccaactttatctgcacaattgcag
cgactgagagcttgtttcgatatttatcttgaaacagagggtatagctcctcaggagaag
atattctttcatccagtcagaggcaggaccagggcgaggccgtacaaatatttgactctg
ggtggaggaatttttacccatcgatag
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