Diprion similis: 124411161
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Entry
124411161 CDS
T08947
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dsm
Diprion similis
Pathway
dsm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124411161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsm03009
]
124411161
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
Pre-60S particles
RNases
124411161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
124411161
NCBI-ProteinID:
XP_046746058
LinkDB
All DBs
Position
10:13135825..13141339
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AA seq
708 aa
AA seq
DB search
MKTPTGKQLQRIEKKRKKMAALLEITKLNDRDREAKALALKQAVGGTNSELTQEETLMNL
SSDQGTNSEASSSESPSRKRPCTRTLDAAAQESTDSEPLTTEVENNEEPDPLANKKPRLS
GEEYAKLKQELKERKQRLKVIPRFRLKNVGENASLNVDVKDEDRIPIFLSDVQHLLMYSL
LGHHSPYLPARWCLLEKYNKVAHTVVLVVEGLSLYHFNAYESMFTNITTNMAHRLEVVTP
TAYGGSIIEDLAAVPLTGTQSDRLIKLNWLVSEFGSMEAALQSTGDLVKLLKTVFPMRAA
DKLGVGDKSFELHPNLPVTDKFPRTQLLLSPWQLVEENYPLPLKGELARKYEKYILTKDM
YVEATPRSPMFGLDCEMCRTTTGFLELTRISIVDERMNIIYETLVKPENEITDYLTRYSG
ITKEILRNVTTTLVEVQNALREILPPDAILVGQSLNSDLHTLKMMHPYIIDTSVIYNITG
DRYRKTKLQTLAREFLNERIQEGRGGHCPSEDSKASLKLAQLKLANSLDFGDAVLVGQKN
MEILKMGAEKRKSLKVIDRMELRNYATSIFNHVTKDKKTAAIVGTEDVMNEYSRYLKNSS
LSIMDDQNFDTTDQVRLVVAESNKHAVSRASNVLMEHAFTLCHLRITEDQLKNENIEKTF
RTVNKWVQKLWQHTAIHGLGCVVFGGQNNAANGACFLDIKKDVTVIGP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaccgacgggaaaacaactacagagaatcgaaaagaaacgcaaaaaaatggcc
gcgcttctagagatcaccaaactcaacgaccgagatcgagaagctaaggcgctcgccctg
aaacaagcggtaggtggcacaaattctgaactaacacaggaggagacactgatgaatcta
tcgagcgatcaaggaacgaacagcgaagcctccagcagcgaaagtccgagcaggaaaaga
ccatgtacgagaacgctggatgctgctgcacaggaaagcactgattctgagccgctgaca
acagaggtggaaaacaatgaggaacctgatccactcgccaacaaaaaacctagactgagc
ggcgaagagtacgccaagttgaagcaagagctgaaggaaagaaaacagcggttgaaagtg
atccctaggttccgtttgaaaaacgttggggaaaatgctagtctaaatgtcgacgtcaag
gacgaagatagaattccaatatttcttagcgatgtgcaacatcttctgatgtactccttg
cttggccatcactctccgtatttgcctgccagatggtgtttgcttgaaaagtataacaag
gtagcgcatacggttgttctcgtagtcgaaggattgtcgttgtatcatttcaacgcctat
gaatctatgttcactaacataacgacaaacatggcacatcgactcgaagtggtcactccg
actgcgtacggaggatcgatcatcgaggatttggctgctgtccccctcacaggcactcaa
agcgatcgactgatcaaactaaattggctggtttcagagtttggatcaatggaagctgcc
ttgcagagcaccggtgatctagttaagctgttgaaaacagtgtttccaatgcgagctgca
gataagctaggtgtcggggataaatctttcgagcttcatccgaatttgcctgtcaccgac
aagttcccaagaactcagctcctcctgtctccgtggcaattagtcgaagaaaattatcca
ctgccactgaaaggcgagttagcaagaaaatatgaaaagtacatcttaacgaaggatatg
tacgtcgaggctactccaagatctccaatgtttggtctggattgtgagatgtgtagaaca
acgaccggcttccttgagctaactaggatatctatcgtcgatgaaagaatgaatattatt
tacgagacactggtgaaaccggagaatgagattaccgactatctcactcggtacagtgga
atcacaaaagagattctccgcaatgtcacaacaactttagtagaggtgcagaacgcgttg
agggaaatattaccaccggacgctattctagtgggacaaagtttaaattctgatctccac
actctcaagatgatgcatccttacattatagacacatccgtgatatacaatatcactggg
gacaggtacagaaaaaccaaactccaaacattagcgcgagagtttctcaatgagagaatc
caggaaggacgaggtggacattgtccttccgaggactcaaaggcttcgctgaagttggcg
cagctgaaattggcaaacagtctcgatttcggtgatgcggtactggtcggtcagaagaat
atggaaattctgaaaatgggtgcggagaaaagaaaatctttgaaagtgatagacaggatg
gagctgagaaactacgcaacgtcaattttcaaccatgttaccaaggacaaaaagacagcg
gctatagttggcaccgaagacgtgatgaatgagtattctaggtacctcaaaaattcatct
ttaagcattatggatgatcagaacttcgacacaaccgatcaggtgcgtctcgtagttgcc
gagagcaataaacacgcggtatctcgagcctcgaacgtgttgatggagcacgcgtttact
ctttgccacctacggatcacggaggatcaattaaagaacgagaacatagaaaaaactttc
agaacggtgaataagtgggtgcagaagctctggcagcacacggctatccacggtctaggc
tgcgttgtgtttgggggtcaaaacaacgctgccaacggagcctgtttcctcgatataaag
aaggacgtgacagtaatcgggccttag
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