Diprion similis: 124411703
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Entry
124411703 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124411703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124411703
03009 Ribosome biogenesis [BR:
dsm03009
]
124411703
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124411703
Spliceosome [BR:
dsm03041
]
Complex A
U1 snRNP components
U1 related factors
124411703
Complex B
124411703
Ribosome biogenesis [BR:
dsm03009
]
Eukaryotic type
Pre-60S particles
Helicases
124411703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Helicase_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124411703
NCBI-ProteinID:
XP_046746941
LinkDB
All DBs
Position
10:complement(14896521..14902737)
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AA seq
567 aa
AA seq
DB search
MINNRIFVTRRTIDVAAALLGFSPTTYGGSIAGYHSGGGRDGAGGGQRYGYGGGGSYSSR
FGGRGGGGGVSNRVAGNNLRKPNWDYEDLKPFKKDFYVPHSNVSSRPPHEVEIYRGDKQI
LLKGDSVPNPIQYFEEGNFPDYVIQKIKKQGFAEPTPIQAQGWPIAMSGQNMVGVAQTGS
GKTLGYILPAIVHINNQQPLNRGDGPIALILAPTRELAQQIQTVAAEYGSLSSVRSTCIF
GGAPRGGQVRDLEGGVEICIATPGRLIDFLEQGITNLQRCTYLVLDEADRMLDMGFEPQI
RKIIEQIRPDRQVLMWSATWPKEVRNLAEEYLTNYTQLNIGSLTLCANHNILQIIDVCQE
HEKGTKLESLLQEIGSVNEDGGKTIIFVATKKKAESITRRIRQYGWPAVCMHGDKSQNER
DNILREFRNKKGSILVATDVAARGLDVDDVRYVINFDYPSSSQDYIHRIGRTGRSQNTGT
SYAFFTPQDARQAKDLINVLQEANQVINPKLSEMASQSGGGGDGDGDGDGGYGSRNRWGG
GHRRENDYSGGKKRFVMGRSYGYNNYE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataaccggattttcgtcactcggcggacaatcgatgttgctgccgctcttctt
ggcttctcgccgacgacctatggtggctcaattgctggataccatagtggaggtggtcgc
gatggagctggcgggggccagagatatgggtatggaggtggaggcagttacagtagtcgt
tttggtggcagaggaggaggtggaggtgtcagcaaccgtgtggctggcaacaatctgagg
aaaccaaactgggactatgaggacctgaaaccattcaaaaaagacttctatgttccccac
tctaacgtgtccagccgaccgcctcacgaggtggaaatttacagaggagacaagcagatc
cttctcaagggcgacagcgttccaaaccccattcagtatttcgaagagggaaattttcct
gactatgtaatacagaaaatcaaaaagcagggatttgcagaaccaacgccgattcaggct
cagggctggcccattgccatgtcgggacagaacatggtcggcgtcgctcaaaccggttca
ggaaaaactctaggttacatactcccagccattgttcatatcaacaatcagcagcctctg
aatcgcggcgatggacctatcgctttgatccttgcaccgaccagagaactcgcacagcaa
attcagacagttgcggcagaatatggctctctttcctctgtcagaagcacgtgcatattt
ggcggagcacctaggggcggccaggttcgagatctggagggaggggtcgagatttgcatt
gccactcctggtcgcctgatagattttcttgaacagggaattaccaatttacagagatgc
acgtacttggtgttagacgaagctgacagaatgcttgatatgggatttgaacctcagatc
agaaaaattattgagcagattagacctgacagacaagtacttatgtggtctgcaacttgg
ccaaaggaagttcgcaaccttgctgaagagtatttaactaactacacacagctgaatata
ggctcgctcactctttgtgcaaatcacaacattcttcagattatcgatgtttgccaagag
catgaaaaaggaaccaaactggaaagcctgctgcaagaaatcggaagcgttaatgaagac
ggcggaaagacgattatatttgttgctactaaaaaaaaggctgaaagcatcacaagaagg
atccgacagtacggatggccagcagtatgcatgcatggcgataaatcgcagaatgagcgt
gataacattctcagagagtttagaaacaagaagggttcaatccttgtagcgacagatgtt
gctgcacgtggcctggatgtggatgatgtaaggtacgtgatcaatttcgactacccgtcg
tcgtcacaagactatattcacagaatcggtagaacgggccgatcgcaaaatacaggaaca
agctacgctttcttcaccccacaggatgccagacaagccaaggacttgatcaatgtactt
caagaagctaatcaggttatcaatcccaaactaagcgagatggcttcgcaaagtggcggt
ggcggcgacggcgacggcgacggcgacggcggatacggaagcaggaatcgttggggaggc
ggacatagacgcgagaatgattattctggcggtaagaagcggttcgttatgggccgcagc
tacggttataacaattacgaatga
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