Diprion similis: 124412221
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Entry
124412221 CDS
T08947
Name
(RefSeq) high mobility group protein DSP1-like isoform X1
KO
K10802
high mobility group protein B1
Organism
dsm
Diprion similis
Pathway
dsm03410
Base excision repair
dsm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124412221
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124412221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsm03036
]
124412221
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124412221
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsm04147
]
124412221
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
124412221
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124412221
MMR (mismatch excision repair)
Other MMR factors
124412221
Exosome [BR:
dsm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124412221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
124412221
NCBI-ProteinID:
XP_046747879
LinkDB
All DBs
Position
11:complement(4105957..4114558)
Genome browser
AA seq
436 aa
AA seq
DB search
MSEHHRVGGGWGTASPGAREDGSGGPVWWPGGLNAVSAEQQQQTMQQHHQHLINQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQLSQHHQDIVRSTAAVAATQQLFSYKMASSFQNPATT
GTQSTVSTSAPVGSCMRGGYDYRLGGAGGGAGGPGAPPSVQWWYPGSVMEASQNNLHQQQ
LQQQQQQQHLSPITTQASTPPIMSPHQIQQLPQQQNNLQNHAQGLQRGKMPRGKAADAKP
RGRMTAYAFFVQTCRQEHKKKHPEENIVFQEFSKKCALRWKTMSDKEKKRFHEMAEKDKK
RYDAEMQNYTPPKGENKTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKSLNPEYGV
GDIAKELGKKWSDAEPETKSKYEAMAEKDKARYEREMTAYKKKLKTGGPGVGAPAIAVKH
DSEEDAEEEDGEEDDE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacaccaccgcgtcggcggtggatggggcacggcgtccccgggtgcgcgagag
gatggatccggtggaccggtatggtggcccggcggcctgaacgccgtatcggccgaacaa
cagcagcaaaccatgcagcaacaccaccagcacttgatcaaccagcaacagcagcaacag
caacagcagcagcagcagcaacaacagcagcagcagcagcaacagcaacaacaacagcag
caacagcaacagttatcccagcatcatcaggacatcgttagaagtacggcggcggttgcc
gccactcagcaacttttctcgtacaagatggcctccagcttccaaaatccggcaactacc
ggcactcagtcgaccgtttcgacgtcggcgcctgtcggatcctgcatgcgggggggttac
gattacaggcttgggggtgctggtggaggtgccggcggacccggggcaccccccagtgtt
cagtggtggtatccaggcagcgttatggaggcatcgcaaaataatcttcatcaacaacag
cttcaacagcagcagcaacagcaacacctatcgcctattactacgcaagcttccacgccc
cccattatgtccccgcatcagatacagcagctaccacaacagcaaaataatctgcaaaat
cacgcgcagggcttacagcgaggaaaaatgccgagaggaaaggcagctgatgctaagccg
agggggcgaatgactgcgtacgcgttcttcgtacagacttgtcgccaggagcacaagaag
aaacatcccgaagaaaacatcgtgttccaggaattttccaaaaagtgtgctctcaggtgg
aagactatgtcggataaggagaagaaacgcttccacgaaatggctgagaaagataagaag
aggtatgatgctgagatgcagaattacactccacccaagggtgagaataaaacaggcaga
ggcaagaaacgcaagcacatcaaagatccaaatgcacccaagagatcattgtcggccttt
ttctggttctgtaatgacgagcgtggtaaggtcaagtcattgaatccggaatatggagtt
ggagatattgcaaaggagctaggaaagaagtggtctgacgcagagcctgaaacgaaatct
aagtacgaagccatggcagagaaggataaggctcgatatgaaagggaaatgactgcgtac
aaaaagaaactgaagaccgggggacctggcgtcggagcccctgcaatcgctgtgaaacac
gacagcgaggaggatgcggaggaggaagatggtgaagaggatgacgaataa
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