Diprion similis: 124412299
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Entry
124412299 CDS
T08947
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dsm
Diprion similis
Pathway
dsm03022
Basal transcription factors
dsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124412299
09124 Replication and repair
03420 Nucleotide excision repair
124412299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsm03021
]
124412299
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124412299
Transcription machinery [BR:
dsm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124412299
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124412299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
124412299
NCBI-ProteinID:
XP_046748010
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All DBs
Position
11:complement(11340465..11346999)
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AA seq
561 aa
AA seq
DB search
MTTSSEDVLMQVGQVRYKKGDGTLYVMNERIAWMLDNRDTVSVSHKYADIKLQKISPEGK
AKIQLQVVLHDGSSSTFHFVNRNGQEAQIKDRDDVKELLQQLLPKFKRKVNKELEEKNRM
LQENPTLLQLYRDLVITQVISSEEFWAQHAAEYTQAKKGQRQDIGVNGAFLADIKPQTDG
CNGLKYNLTVDIIECIFKTYPAVKKKHVENVPQKMSESDFWTKFFQSHYFHRDRINAGTK
DLFTECAKIDDQELKKDIQTGINDPLVDISSFEDKSIDENYGSGSGKSDKASGNIVHQSM
IKRFNQHSIMVLKASTANTSQDTNQLHLNGTTTLSTTKTETANQIEDRAKAKKLRIQEKL
VYDDLDASCDLNAKTTAPLNLSHIDRYLHGPVPGSGSAEATNEELQVTLTQLRREASNWV
NGNHVPRHAATSLVSPAAAVSALGELTPGGALMKGFREDSLGQLIPKDLEKELRNMYMCT
CELLRHFWKSFPPNTPQLEEKAVRMHEALHRFHSARLKPFEDRIQREFSAVSQHLTSHLN
QLLNTAYRKFGVWQQRKLQMR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgactacttcttccgaagatgttttgatgcaagtgggccaagttcgttataaaaagggc
gatggcactttgtacgtaatgaacgagaggatagcatggatgttggataacagggacact
gtttccgttagtcacaaatacgctgatattaaacttcaaaaaatatcgccagagggtaaa
gcaaaaattcaactacaagttgttcttcacgatggatcctcgtctacatttcactttgta
aatagaaatgggcaggaggcgcagatcaaggatagggatgacgtcaaagaattgttgcaa
caacttttacccaagtttaaaagaaaggtcaacaaagaattagaagaaaaaaatagaatg
ttgcaagaaaatccaaccttgctacagctctatcgtgatctcgtaatcacacaagttata
tcttctgaggaattctgggctcaacacgcagctgagtatactcaagcaaagaaaggtcag
cgtcaggatattggagtcaacggcgcttttttggctgacatcaagccgcaaacagatgga
tgtaatggtttgaaatacaatttaacggtagacataatcgaatgtatattcaaaacatat
cctgcggtgaaaaaaaagcatgtagaaaatgtcccgcaaaaaatgtcggagtctgatttt
tggacaaagttcttccaatctcattatttccatcgagatcgtataaacgcagggaccaaa
gatcttttcaccgaatgtgccaaaatagatgaccaagagttgaaaaaagatattcaaacg
gggatcaatgacccattggttgatatttcttcatttgaagacaaatctattgacgaaaat
tacggtagtgggtcaggaaaatctgataaagcctctggcaacattgtacaccaaagcatg
atcaaaaggtttaatcaacatagtattatggtgctgaaagcaagcaccgcaaatacttcg
caagatacgaatcaacttcatttaaacggaacaacaactttatcaacaactaaaactgaa
actgccaaccagatcgaagatcgtgccaaagccaaaaaacttaggatacaagagaaatta
gtatacgatgatcttgatgccagctgtgacttaaatgcaaagaccacagcccccctcaat
ctgtctcacattgatagatatttacatggaccagtaccgggtagcggaagtgcagaagcc
actaacgaagaacttcaagtcaccttgacgcaactcagaagagaagcaagcaattgggtg
aatggaaaccatgtacctagacatgcagcaacctctttagttagcccagcagccgcagta
tctgccttgggagaacttacgcctggtggtgctcttatgaaaggctttcgagaagatagt
ttaggacaattaattccgaaggatttggagaaagaattacgtaatatgtacatgtgtacg
tgcgaattgttaaggcatttttggaagagttttccaccgaacactccccagcttgaggag
aaggctgttcgtatgcatgaggctcttcacagatttcattctgcaaggctgaagccattt
gaggatcgtattcagagggagttttcggcagtcagtcaacacttgactagtcacctgaac
cagctgttgaacactgcctatagaaaattcggagtttggcaacaaagaaaattacaaatg
aggtag
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