Diprion similis: 124412520
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Entry
124412520 CDS
T08947
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
dsm
Diprion similis
Pathway
dsm03030
DNA replication
dsm03410
Base excision repair
dsm03420
Nucleotide excision repair
dsm03430
Mismatch repair
dsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124412520
03410 Base excision repair
124412520
03420 Nucleotide excision repair
124412520
03430 Mismatch repair
124412520
03440 Homologous recombination
124412520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsm03032
]
124412520
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124412520
Enzymes [BR:
dsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124412520
DNA replication proteins [BR:
dsm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124412520
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124412520
MMR (mismatch excision repair)
DNA polymerase delta complex
124412520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
DUF6356
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
124412520
NCBI-ProteinID:
XP_046748415
LinkDB
All DBs
Position
11:complement(1122301..1130411)
Genome browser
AA seq
1102 aa
AA seq
DB search
MNKRPFSGPPSKKNKFRVDDDDDEYPGSFEAELAIMEQMEDEFQEASQASGEPDPADPQM
QVRGPDQENTCSKWNRPAPQPFDPKTDSLTFQQIEVDHYIGQPLAGMPGSKIGPVAIMRM
YGVTMEGNSVCCHVHGFCPYFFVTAPEKFNNSHCKPFKDALNRAVLGDMRSKNDKVTEAV
LVVELIQKQSLYGYSGEDLVPFIKITVALPKLVAPCKRLLEKEMIFPTFSDHIYQAFETN
IEFDIRFMVDTHVVGCSWIKLVPGKWKLRGHPGNDLPLTSRCQLEVDVAWDNFIAHPPEG
EWAKVAPFRILSFDIECAGRKGIFPEANHDPVIQIANMVIRHGDTEPFLRNVFTLDTCAP
IIGSQVLSFQKEAVMLEKWADFVRQCDPDILTGYNINNFDFPYLINRAQHLNVKSFSYLG
RIKDIKSVIKDQVLQSKQMGRRENKHVNFEGRVPFDLLLVLIREYKLRSYTLNAVSYHFL
QEQKEDVHHSIISDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIINYMEMARVTGVS
LCSLLTRGQGVKVVSQLLRKAREKGYLMPTHQGQGSDEQFEGATVIEPKRGYYNDPIATL
DYSSLYPSIIMAHNLCYTTLLPAATQHKLKLTNDKFSQTPTNAMFVKSSVRKGLLPEILE
NLLNARKLAKTELKNETDPFKQKVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISSSTT
AYGRAMIERTKQEVEQKYCVANGYKHDAVVIYGDTDSVMVKFGVKDMAEAMELGKDAADF
VSSKFIKPIKLEFEKIYFPYLLINKKRYAGLLFTKPDKYDKMDCKGLETVRRDNCPLVAN
MMNTCLQKLLIERDPDGATDYAKQIISDLLCNRIDISQLVITKELTKTEYAAKQAHVELA
AKMKKRDAGTAPKLGDRVPYVFTSAAKGTPAYQKAEDPIYVLENSIPIDSNYYLENQLSK
PLLRIFEPILGDKAESLLLRGEHTRTKSVATSRVGALAAFTRKKETCMGCKAILPTGREH
MALCQHCESRESELFQHELLLGRKLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYMR
KKVRIELDAQEKRIDRFGIPAW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcggcctttttccggccctccgtccaagaaaaataaattcagggtggacgac
gatgatgacgaatacccaggatcgttcgaagcggaacttgccatcatggaacaaatggaa
gacgagtttcaagaagcgtctcaggcctcgggggagcctgaccctgcagatcctcaaatg
caagtcagaggtccagatcaagaaaacacttgttccaaatggaatcggccagcccctcag
ccattcgatccgaaaacagactcgctcactttccagcaaatagaagttgaccattatata
gggcagccgctggccggaatgccgggaagcaaaattggaccagtagcaataatgagaatg
tacggagtcacgatggaaggaaactctgtatgctgtcacgtgcacggattttgtccctat
ttttttgtcactgcaccagaaaaattcaataactctcactgcaaaccattcaaggatgct
ttgaatcgagctgtattaggagatatgagatcgaaaaatgataaagttacagaagctgta
ctagtagtagaattaatccagaaacaatctctgtatggatattcaggcgaggacttggtg
ccttttatcaaaatcacagtcgccctgccaaagcttgtggctccgtgtaaacgcttgttg
gagaaagaaatgatctttccaacattcagcgatcacatataccaggcctttgaaactaac
atcgagtttgatatcagatttatggtggatacgcacgtagtaggctgttcatggatcaag
ctagtccctggcaaatggaaattaagaggccatccagggaatgatttgcctttgaccagc
cgttgtcaattggaagttgacgttgcctgggataatttcattgcccatccaccagaggga
gaatgggccaaagttgcacccttcagaatactaagttttgatattgaatgcgctggacgc
aaaggaattttccctgaggcaaatcacgatccagttattcagattgcaaacatggtgata
agacatggagacaccgaacccttcttgcggaatgtgttcacattggatacgtgcgcacca
attatcggttctcaggtacttagttttcaaaaggaagcagtcatgctggagaaatgggca
gactttgtgagacagtgcgatccagatatacttactggctacaacataaacaacttcgac
tttccctacctgataaatcgagcacagcacctgaatgtgaaatccttcagctaccttgga
agaataaaggatataaaatctgtgataaaagatcaggtgttacaaagtaaacaaatgggc
aggagagaaaataagcatgtcaatttcgaaggaagagtgccgtttgatctattgctggtc
ttaattcgagaatacaagttacgttcgtacacgttgaacgcggtaagttatcattttctc
caagaacagaaggaagacgtacatcacagtattatcagcgatctacaaaatgggaatccc
caaacacgaagaagacttgcggtttactgtttaaaagatgcctacttgccgttgaggcta
ctggataagctcatgtgtattatcaactacatggaaatggcaagagtgaccggcgtctct
ctttgcagtttactaaccagaggacaaggggtcaaagttgtttcacagctgttgcgaaaa
gcgcgagaaaaaggctatctaatgccaacgcatcagggtcagggaagtgacgaacaattt
gaaggagcaacagtcatagagccaaaacgtggatactacaacgatccgattgcgacattg
gattacagttctctatatccgagcataataatggcccataatctctgctacacaacgtta
ctacctgcagcgactcaacacaaactgaaactgactaatgacaagttttcacaaacacca
actaacgccatgttcgtcaagtcctcagttagaaaaggactccttccagaaattttagaa
aatttattgaatgccagaaagctagcgaaaacagagctgaagaacgaaactgatccattc
aaacagaaagttttggatggacgacagttggctctgaaagtatcagccaattccgtatac
ggtttcactggagctcaagtaggcaaattgccctgtttggaaatatctagtagtactaca
gcttacggtcgtgcaatgatagagcgaactaaacaagaagtggagcaaaaatactgcgtt
gctaatgggtacaaacacgatgctgttgtgatatatggcgacacggattctgtgatggtt
aagtttggtgtaaaggatatggcggaggcaatggagctgggaaaagacgcagctgacttc
gtttcgtcaaagtttataaaacctatcaagctggaattcgagaagatctattttccgtat
cttttgataaacaaaaaacgatacgcaggtttattattcactaagccagataaatatgat
aaaatggactgcaaaggattggagaccgtgagaagagacaactgcccgttggttgccaac
atgatgaacacttgtttgcagaaattattgatagagagagatccggatggagcaacagac
tacgcaaagcaaatcataagtgatctcctctgcaaccgtatagacatctcgcaacttgtg
ataacaaaggaacttacaaagactgaatacgcagccaaacaggcccacgtcgagttggcg
gcaaaaatgaagaagcgagacgcaggaacggctccgaaactcggtgacagagttccatac
gtttttacgtccgccgcaaaaggcactccggcatatcagaaagcagaggatccgatttat
gtcctcgaaaacagcattcccatagactcaaattactatctggaaaaccaactgtccaaa
cctcttctcaggatattcgaacccattcttggagacaaagctgaatctctgttactgagg
ggagaacatacccgcacgaaatccgtagcgacttcacgtgttggagcactggccgcattt
acgcgaaagaaggaaacttgtatggggtgtaaagccattctgcccacagggcgagagcac
atggccctatgccagcactgtgagtctcgcgaatccgaacttttccaacacgaattatta
ctcggcagaaaattggaggaaaaattctgcagattgtggaccgagtgtcaaagatgccag
ggtagtttgcatcaggaagttttgtgcaccagccgagactgtccgattttttatatgagg
aagaaagttaggattgaactagatgcacaggagaagcgaattgacaggttcgggattccg
gcctggtag
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integrated database retrieval system
