Diprion similis: 124413219
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Entry
124413219 CDS
T08947
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124413219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124413219
Spliceosome [BR:
dsm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124413219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_Nup120_160
WD40_RFWD3
WDR54
Motif
Other DBs
NCBI-GeneID:
124413219
NCBI-ProteinID:
XP_046749611
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Position
12:complement(17513238..17515622)
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AA seq
527 aa
AA seq
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MSDDEDLVYVKKQKTVHYGSLEEAERARLTATSAESSDEERDHNRSPSDTPTTGSALGNV
HISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGP
ADRRSRLRELLASLGEDAIKKKHEDEERPSHQTERDAESTWYHEGPDSLQIARSWIASYS
LPRARDRLEKSREELELPGATRTARRQELLKKLQALSIYCSQIGDSRPISFCQFSPNSKL
LATSSWSGLCKIWSVPECSIARTLRGHTCNVSCIVFHPKATLSEEMLGENASPTCVLASC
ASDGSVKLWGGGNSEEPLAEVEGHEPHRVSRIAFHPSGRFLGTCCHDASWRLWDLEQQAE
VLHQEGHAKAVHCISFQCDGSVVATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGVDFSP
NGFHLATASEDNSCKIWDLRKRSCIYTIPAHTNLLSDVKYQRTEGQYLVTASYDNTAKIW
SNKTWQPLKTLPGHDGKVMCCDISPDHKFIVTSSYDRTFKLWAPENM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaggatctggtttatgtgaaaaagcaaaaaaccgtgcattatggatcc
cttgaggaagctgaacgtgcccgactcacagctacatctgcagaatcttcggatgaagag
agagatcataataggagtccatcagatacaccgacaacaggttctgccctgggcaatgta
cacatatcaaatgaatacatggaacttgaagatgagatgtctaaagataggcaggctctg
cttgaagaatttgagcggagaaaaaaagccagacagattaatgtttcgacggatgattca
gaagtaaaaaaaaacttgcgccaactgggggaaccaatttgtttgtttggagaaggccca
gcagacagaaggtctaggctgagagaattattggccagcttaggtgaagacgctatcaaa
aaaaagcatgaggacgaggagcggccatcgcatcagacagaacgagatgcggaatcaact
tggtaccacgaaggaccagattctcttcaaattgcccgctcgtggatagcatcatattca
cttcccagggccagagaccggcttgaaaaatccagagaagaattagagcttccaggggct
acacgtacggcacgtcgacaggaactcctgaaaaaattacaagctttgagcatttattgc
tcccaaattggagacagccgccccatatcattttgccaattcagtccgaattcaaaatta
ttggcaacatcttcctggtctgggctttgcaaaatttggtctgtacctgagtgctcaatt
gccagaactctcaggggtcatacctgtaatgtaagctgtattgttttccatccaaaagca
acactctctgaagagatgctgggggaaaatgcatcacctacatgcgttctagcaagctgt
gcttcagatggaagtgtcaagctgtggggtggaggcaacagtgaagagccattagcagaa
gttgaaggccatgagccccacagagtatcaaggattgcatttcatccatcgggtcgtttt
ttaggaacctgttgccacgatgcttcttggcgactgtgggacctagaacaacaagctgaa
gttttgcatcaagagggtcacgccaaggcagtacattgcataagcttccaatgtgatggc
agcgttgttgctacgggaggccacgattcctttggcagagtttgggacctgagaacaggc
cgctgtattatgtttatggagggtcacttgaaatctattttcggagttgatttttcgcct
aatggttttcacctggctactgcaagcgaggataattcgtgcaaaatatgggacttgaga
aaaagatcgtgtatttacacaataccagcacacaccaatttattatcagacgtgaagtat
cagcgtaccgaagggcagtatttggttacagcgtcgtatgataataccgcaaaaatttgg
tccaataaaacgtggcaaccattgaagacattgcccggacatgatggcaaagtaatgtgc
tgcgacatctcccctgaccataaatttatagttactagctcgtatgatagaacatttaag
ctctgggcacctgaaaatatgtga
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