Diprion similis: 124413384
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Entry
124413384 CDS
T08947
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dsm
Diprion similis
Pathway
dsm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124413384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsm04121
]
124413384
Enzymes [BR:
dsm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124413384
Ubiquitin system [BR:
dsm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124413384
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124413384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
zf-C3HC4_2
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
zf-C3HC4
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR35_TULP_N
zf-RING_UBOX
zf-RING_2
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
WD40_like
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR75_1st
zf-C3HC4_4
Beta-prop_IFT140_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
zf-rbx1
U-box
zf-RING_10
Polyhedrin
TRAF3_RING
Sina_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124413384
NCBI-ProteinID:
XP_046749873
LinkDB
All DBs
Position
12:10689577..10702711
Genome browser
AA seq
696 aa
AA seq
DB search
MSVGGSGELENSGVGVSSGNEGSPLTTNRGARSVKRLLHSASILHGISGTLEDKNNDYLC
PICFEVINEAHITRCGHTFCYQCITNSLEANGRCPKCSFTLTQQDIFPNFVLNELISKYK
TRMKGLADLGGGTGSNRVGGISGTEIDMLVPVCDGLRDFVAAESANLTLPDVNVMLEVLT
QRKNLLEAESCATQNKLLHEFLRHLLRHKEEQRIQLVKEVALIKRDMEEVENILKEVQSK
CPRVEDLKRSSETDTAQVSAIKQEMIELIDIIDSNMVKTGDPNPPGLSSNDLFASTMTQK
QNNYAASTLAIRRKRMHAHFDDFVQCYIDSRAKDLLFGQSPKVPHQTETEPGTSSGLDVF
RENLVKFLRYNSLQTLATLNYSSDMFNNSTIVSSIEFDKDNEFFAIAGVTKRIKVFDYGA
VIRDTVDIHYPCTEMICSSKISCISWNSYHKGMLASSDYEGTVTVWDAITGQRTKLFQEH
EKRCWSVDFNDVDTRLIASGSDDARVKLWSLNTDHSVASLEAKANVCCVKFNPKSSCHLA
FGSADHCVHYYDLRNMKEALCVFKGHRKAVSYVKFVNKEEIVSASTDSQLKMWNIDNPHC
LRSFVGHINEKNFVGLATDGDYVACGSENNALYIYYKGLTKQLFSSKFDAARSVLELQEK
KEEELNEFVSAVCWRQMSNVVVAANSQGIIKVLELV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttggtggcagtggcgaacttgaaaacagcggtgtgggtgttagctcaggtaat
gagggttcgccattaaccactaatcgaggtgcacggagtgttaaacgtttattgcactct
gcgagtatactccacggtatcagcggtacccttgaagacaaaaataacgattatctatgt
cccatatgtttcgaagtgataaatgaagcacacatcactcgatgcggtcacacattttgc
taccaatgtattaccaactcgctcgaagccaatgggcgctgcccgaaatgtagtttcaca
ctgacccagcaggacatatttccgaatttcgtattgaacgagttgatctcaaagtataaa
acgcgaatgaaaggccttgccgatttgggaggtgggacaggaagtaatagagttggaggt
atatctggaacagaaatcgatatgcttgttccagtatgtgatggactgagagactttgta
gcagcagaaagtgctaatttaactttaccagatgtaaatgtaatgctggaggttcttacg
caaaggaaaaatttactcgaagctgaatcctgtgcgactcaaaataaattgcttcatgaa
tttctgagacacttgctcaggcacaaagaggagcaaagaattcagttggtgaaggaagtc
gctttgatcaagcgtgacatggaggaagttgaaaatattttaaaagaagttcaaagcaaa
tgccctcgtgttgaggatttgaaaagatctagcgaaactgatactgcacaagtttcggct
atcaagcaagaaatgatagagctaatcgatatcatagactcaaacatggtcaagaccgga
gacccaaatccaccaggtttaagcagtaacgatctttttgcttcaacaatgacacagaaa
caaaataactatgccgcttcaactctggcaattcgccggaagagaatgcatgcacatttt
gacgattttgttcaatgttacattgactctcgtgccaaagatctactttttggacagtca
ccaaaggtcccccaccaaacagaaacggaaccaggcaccagttctggattagatgtattc
agggaaaatttagtcaaatttttaaggtataactctctgcaaacattagctacattgaat
tattcatcggatatgtttaataactctaccatcgtatcaagtatagagtttgacaaagat
aatgaattctttgctatcgctggtgtcacaaaacgcatcaaagtgtttgattacggagca
gtgatacgagatactgttgatattcattatccgtgcactgaaatgatatgtagttcaaag
atatcgtgcatctcgtggaattcctatcataaaggaatgttggcttcttcagattacgag
ggaacagttactgtatgggatgctataactggtcaacgtacgaaattatttcaagaacat
gagaaacgttgttggtccgttgacttcaacgatgttgacacaaggctgatagcttcagga
tcagatgatgcaagggttaaattatggtctctcaacactgaccactctgtagcttcactt
gaggctaaggcaaatgtttgctgtgttaaatttaatccaaaaagctcttgccatttagcg
tttggatcagcggatcattgcgtgcattattatgatttgcgcaacatgaaagaagcatta
tgtgtatttaaaggccatcgcaaagctgtttcctatgttaaattcgtaaacaaagaagaa
attgtttctgcaagtacagattctcagttgaaaatgtggaacatcgataacccccactgc
cttcggtcttttgtgggtcacataaacgagaagaactttgttggcctagcaactgacggt
gattatgtcgcgtgtgggtcagaaaataatgcactctatatttattacaagggattaacg
aagcaattgttctccagtaagtttgatgctgcgagaagtgttttagagttgcaagaaaaa
aaggaggaagaacttaatgaatttgtatcagctgtctgttggagacaaatgtctaatgtt
gtagtagcagctaattctcagggtattattaaagttttggaacttgtttga
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