Diprion similis: 124413453
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Entry
124413453 CDS
T08947
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124413453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsm03041
]
124413453
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124413453
Spliceosome [BR:
dsm03041
]
Complex A
U2 snRNP components
U2 related factors
124413453
Complex B
124413453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
124413453
NCBI-ProteinID:
XP_046749999
LinkDB
All DBs
Position
2:complement(15862857..15867537)
Genome browser
AA seq
1027 aa
AA seq
DB search
MVRSGEKERHYRRRSRSRSASPEKKRRRSRSRDREREKTRHKERRSRSRERERDRSDRKE
RTDRERERDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRERKDKDKGDTEDLPFDHTKLD
KEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKSSILANLQLPMKKWSLEDDSD
EETPVILNSTKEIKEEGDIKEELEVIPEEIKIQEEEVDPLDAFMAEVQEEVRKVNKLDPN
RSKPTNNGTGTGNTQSGGVVIVTGVAKKQVAKQKGELIEQNQDGLEYSSEEEGENLHETA
AGIANKQKRELAKVDHAATEYQPFRKSFYVEVPEIARMTPEEVEVYKEELEGIRVKGKGC
PKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFL
LPMFRHILDQTPLVDGDGPIALIMTPTRELCMQIGRDSKRFTKSLGLSHVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIM
ENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFY
KLLEVLGHYQDKGSTIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTIMDFKA
GRTKLLVATSVAARGLDVKQLVLVLNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITPEQ
ERYAGDILRAHELAAVPVPEPLRQLWEGYKTRQAADGKKVHTGGGFSGKGFKFDESEAAL
ANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSVANISVPGQPVPS
ATDKLELARRAASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKIVAEQLAAKLN
TKLNYQPREEDLVEGEGEPGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAG
LTVRGTYITPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQSSGTHTGS
RGRYKVL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagcggtgaaaaggagaggcactaccggaggaggtccagatcccggtctgca
tcaccagagaagaagcggagaagatccaggagccgagaccgagaaagagaaaagacacgc
cacaaggaacgtcgaagccgatctagggaaagagagcgcgacaggagtgataggaaggaa
cgtacagacagggaaagggaacgtgatagaaaacgtggcgacagtaaagaaaagcgtctt
acaggctcaaaatcctcgcgctcgggtaaagatcgatcgaacagatcgcggtcacgagaa
cgtaaggacaaagataaaggtgacactgaggatttgccctttgaccacaccaaattggat
aaggaggaggagcaaaaaaggctggagctagaaatgcaaaaacgacgcgaaagaatagaa
agatggcgtgccgaaagaaagaagaaggaattagaggctaccaaaaaggatggaaaatcg
tctatcttagcaaaccttcagcttcccatgaaaaaatggtccttagaagacgacagtgac
gaagagactccggtcatccttaacagtactaaagaaattaaggaagaaggagatatcaaa
gaagaactcgaggtgataccagaagaaattaaaatacaggaagaagaagttgatcctctc
gatgctttcatggctgaggttcaagaagaagtgcgaaaagttaataaactcgaccctaac
cgatcgaaaccgaccaataatggaacaggtactggaaacacgcagagtggtggagtggta
atagttactggtgtagctaaaaaacaggttgcaaagcagaagggagagttaatagaacag
aatcaagatggattggaatattctagtgaagaagaaggtgaaaaccttcacgaaactgcc
gctggaatagccaataaacaaaaacgtgaactggcgaaagttgatcacgcagcaacggaa
tatcaaccattcagaaaatcattttacgttgaagtccctgaaattgcacgaatgactcct
gaggaagtagaagtatataaggaagaactcgagggaattcgtgtaaagggaaaaggttgt
ccaaagcctatcaaatcttgggcccaatgtggggtcacgaaaaaagagttggaagtacta
aaaaaactcggttatgaaaagccgacgcccatacaatgtcaagccattccagcgatcatg
tctggccgtgatttaatcggtattgctaaaaccggaagtggtaagacactagcctttctg
ttgccaatgttcaggcacatacttgaccaaactcctttggtcgacggcgatggacctatt
gcgttgatcatgacaccaactagggaactttgtatgcaaattggccgagactcaaaaaga
tttacaaaatctttgggcctctctcatgtatgcgtatacggtggtaccggaatttcggaa
caaatagcagaactgaaaagaggtgcagaaataattgtatgcacacctggtagaatgatt
gatatgctggctgccaacagtggacgtgtcaccaatttgagaagagtgacttatgtcgtt
ttggacgaggctgatagaatgtttgatatgggtttcgaaccgcaggtaatgcgaataatg
gaaaacgtcaggccagaccgccagacggtccttttcagtgccacattccctcgacaaatg
gaggccttagctagacggatacttactcgtcccgtagaagttcaagtcggtggtcgttct
gtggtgtgtaaagacgttgaacagcatgtcgtagttcttgaggaggatcagaaattctat
aagcttctcgaagtgcttggacattatcaggataaaggctctacaatagttttcgtggac
aagcaggagaatgcagatacactgttgaaagacctaatgaaagcttcgtactcatgcatg
tctctacatggtggaattgatcagtgcgatcgagattctactattatggattttaaagct
ggtagaacgaaattgttggttgccacttcagttgcagccagaggacttgacgtaaaacaa
cttgttctcgtcctgaactatgactgtccaaatcattatgaagattacgttcatagatgt
gggaggactgggcgtgccggaaacaaaggatatgcatacacatttatcacacctgaacaa
gaaagatatgcgggtgatattctacgagcccatgaattagcagctgtaccagttccggaa
ccgttgcgtcaactttgggaaggttacaagactcgtcaggcggctgacgggaagaaagta
cacaccggtggaggtttcagtggaaaaggttttaaattcgatgaatcagaggcagctctg
gcgaatgagaagaagaaattccaaaaagctgccctaggtttgcaagactccgatgatgaa
gacatcgaaaatgacattgatcagcagatcgaaagtatgttggcaccaaagcgtactgtt
cgcgaaattgctagaccatctgtagcaaatatttctgttcctggacaacctgtaccaagt
gccacagacaaattagaacttgctaggagagccgcatctaaaattaacattgccaaaaat
ctgggcgctgaggcgaagggggcgacccaacaagcggcagaagctattctcaagggtgca
gggcccacaaaccttatcaccgccaagatagtagctgaacaactcgctgcaaagttgaat
accaaactgaactaccaaccgagagaagaagatctcgtcgaaggagagggtgaacccggt
gaacagactttccgaaaatacgaagaagagcttgagatcaatgactttccgcaacaagcg
agatggcgcgttacaagcaaagaagctctcgcccagatttcggaatattcagaagctgga
ctcactgttcgagggacatatatcacaccgggaaaagctccgccggaaggtgaaaggaag
ttataccttgcaattgaatcgaccagcgaattggctgtcagtaaagcaaaggcggaggta
tcccgtcttattaaagaagaactcattaaactccagtcctcgggaacgcatacaggatcc
cggggacgatataaagttttataa
DBGET
integrated database retrieval system
