Diprion similis: 124413588
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Entry
124413588 CDS
T08947
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dsm
Diprion similis
Pathway
dsm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124413588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsm03021
]
124413588
03036 Chromosome and associated proteins [BR:
dsm03036
]
124413588
Transcription machinery [BR:
dsm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124413588
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124413588
PBAF complex
124413588
GBAF(ncBAF) complex
124413588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124413588
NCBI-ProteinID:
XP_046750245
LinkDB
All DBs
Position
12:14114337..14119676
Genome browser
AA seq
1048 aa
AA seq
DB search
MLSLGPKKDGGPNAKFFESPDILGQLDGVKQWLLKNSKKYVQTDPPTNKSLATLVVQLLQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGLCQILATAFRFKQEQGWRRFDFQVGKSGS
RMDRAVEMLVAAERALVQNRCMTIPCVYVRPDVDKNTASKVKEVVRRHQGTIAEAEADAT
HIVYPVADPLEEEYARPYLRRERSVLLHWYYFPDSYDSWTTLDLPWDFPEGPLGIGNTSG
SDEIIDSRPQYRVSATWALDLDQYNEWMNEEDYDVDENGQKRVHKYRLSVEDLMAQPSHP
PPSSAKKQKRKRSPSPPPKIGKRKSGRGPAGLQGSSTSLATPKKSRGGVDEEEDLTQGME
DPPAEPRIIEVVASPANPPSVGSGGGSTAGSGSLSTTGNKKQDNELQPLKSGNMADLDEP
IDGDKGSTQGAQEREERDASKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTI
EKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVH
AFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSSAAKSL
LDLEKKPIVVGLGPEEKSGLGVMTNFGLKVDQYSRKPAVLKSKQAAGATRDWTEQETLLL
LEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSK
AGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANPDGK
FDPSAGLAQSGIAGTGPPEPPEDPAVSANSATSSSASVTSPHASTAESKKEELQDIKVKE
GVDATQVPPQSMKKEESVESERDQPEKIEVDPKENDDEAKSKGDPEEIEAKEKRDKVVRD
AQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMER
EREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQSQHPPWQASNTQ
QQQQQQQQPPSPQPQVAQPPPHTPPQQA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctctctctggggcctaaaaaggacggcggtccaaatgcgaaattcttcgagtctcca
gacatactgggccaactggatggagtcaaacagtggcttctaaaaaattctaaaaagtat
gttcaaaccgatccacccacgaataaaagtctcgcgactttggtcgtccaattgttgcaa
ttccaggaagataacctcggaaaaaatgtgtcaaaaccgccaatgacaagacttcctatg
aagtgtttcttagattttaagcctggcggtggtctttgtcaaatattagctaccgcgttc
agatttaaacaggaacaaggatggcgacgtttcgactttcaagtcggcaagtccggttct
cgcatggatcgtgcggtggagatgttagtggcagcggaacgggcattggtacaaaatcga
tgcatgacaataccctgtgtgtatgtgagaccagatgtagacaaaaatacagcgtccaaa
gtcaaggaagttgttagacgtcatcagggaacaattgccgaagctgaggctgatgcaaca
cacattgtttatccagtagccgatcccctcgaggaagaatacgctcgtccttacttgagg
cgtgaacgctcagttctattgcactggtactactttcccgacagttacgactcatggaca
acattagatctgccttgggattttcctgaaggtcctctggggataggaaatacaagtgga
agtgatgaaattattgattccagacctcagtatcgtgtgtcggctacttgggctcttgat
cttgaccagtacaatgagtggatgaacgaagaggactacgatgttgatgaaaatggacag
aagagagttcacaagtaccggctttccgtcgaagacttgatggctcaaccgtctcatcct
ccaccttcgtctgccaaaaaacagaaacgaaaacgttcccccagtccacctccaaaaatt
ggaaagcgtaaaagtggtcgcggaccagcaggactccaaggctcgtccacttcattggct
actccgaaaaagtctcgaggtggcgtcgacgaagaagaagatctgacacaggggatggaa
gatcctccagctgaacccaggataatagaagtggtagcaagtccagctaatccaccttca
gttggatctggtggtggatctacggctggtagtggaagtttgtcgacaacaggaaacaaa
aaacaggataatgaattacaaccgctaaaatctggcaatatggctgatttggatgagcct
atagacggtgacaaaggaagtactcaaggggctcaggagagagaggaacgtgacgcaagt
aaggaaagaggagagggtgggaagggagatgagccggaagataatgttactgagcaaacg
caccatattgttgtacctagctactcagcttggtttgattacaactcaatccatacgatt
gaaaaacgtgctttgtccgaattttttaacggaaaaaataaatcgaaaacacccgagatc
taccttgcctatcgcaattttatgatcgatacttaccgactaaatccaacggaatatatc
acctctactgcctgcagacgtaatttagcaggagacgtgtgtgccattatgcgtgttcat
gcgtttctggagcagtggggtctcattaattaccaagttgacgcagaatctagaccaacc
ccaatgggtccaccacctacatctcacttccacgttctctcagacactccatctggactg
gcgcctgttaatccgaatcctcccaagactccgcagccttccagcgctgcaaaatccctg
ttggatttggaaaagaaacctattgtcgtaggcctgggaccagaagaaaagagcggactt
ggagttatgactaactttggtctgaaggtggatcagtattccagaaagcctgcggtttta
aaaagcaaacaagctgctggtgccactcgcgattggaccgagcaggaaacgctattgtta
ttagaagggttggagctccataaagatgactggaacaaagtttgcgaacatgttggatct
cgcactcaagatgagtgcatacttcacttcttacggctacctatcgaagatccgtacctc
gaagaaggaggccctgaaggtctgggaccgcttgcctatcagcctgttcctttttcaaag
gctggtaacccggtcatgagcacggtcgctttcttagcttcggttgtggatccaagagtg
gctgctagtgctgctaaagccgctatggaagaatttgcagctatcaaagatcaagtgcct
gctgccctactcgatcagcatcttcgtaatgttcaagcaagtgctaatccagatggcaaa
tttgatccatcggcaggactcgcgcagtccggtattgcaggaactggacccccagaacct
cccgaagatcctgctgtctcagctaatagtgcaacttcctcatctgcaagtgttacttct
cctcatgcttcgactgcggaaagtaaaaaggaggagcttcaggatattaaagtcaaggag
ggagtggatgctacgcaggtgccaccccaatctatgaaaaaggaagagtcagtggagagt
gaacgtgaccagcctgaaaaaatagaagtcgatccaaaggagaatgatgatgaagctaag
tctaaaggagaccctgaagaaattgaagctaaagaaaagagagataaggtggttagagat
gcgcaactacaatctgctgcggcggccgcgttagcagctgcagctgtcaaagcaaaacac
ttagcagcggtagaggaaagaaaaatcaaatcattagtggcactgctggttgaaactcag
atgaaaaaacttgaaataaaattgcggcatttcgaagagctcgaaacaacaatggaacgg
gaacgagagggcctggagtatcagcgccagcaattaattacagaacggcagcaatttcac
ttggaacaattaaaagcagcggaatttcgtgcgcgacagcaagcacaccagcggctggct
caggaacaacagcaacaacagcagagtcagcatccaccatggcaagcatccaatactcag
caacaacagcaacagcaacaacagccacctagtccgcagccacaggtggcgcaaccgcct
ccgcacaccccacctcaacaagcgtaa
DBGET
integrated database retrieval system
