Diprion similis: 124413796 Help Entry 124413796         CDS       T08947                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism dsm  Diprion similis Pathway dsm03018   RNA degradation Brite KEGG Orthology (KO) [BR:dsm00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     124413796  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dsm03019]     124413796 Enzymes [BR:dsm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      124413796 Messenger RNA biogenesis [BR:dsm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      124413796   mRNA degradation factors    3'-5' decay     Ski complex      124413796 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel ResIII DEXQc_Suv3 Helicase_C ATPase_2 MTR4-like_stalk Motif Other DBs NCBI-GeneID:  124413796 NCBI-ProteinID:  XP_046750529 LinkDB All DBs Position 13:1263660..1268624 Genome browser AA seq 1232 aa AA seqDB search MNTRVKDLSVNLPFGPPPILPDIRSVLKEYIECPERLPIHDVEKVQCYWPREPDILALLK HDVAPVGTNLKFDRDPITGRISDLREVVVEGAGENPRNSMSMSRAPGPPAEGVRGSASNF PFWPGGFDIPELPKDVASVEINFESNLRTLAKGFKSGIEFAADNCIPRNIGDTLESRTSP APEPEPEQDSNAETINLMAIVHEQENLLGLWSSPGVKPRDENGDQKKEIQNGNLLVDLDK VTNLQPECNLPVLKITEKATFTKTSTEWAEVLDVSVPVADFEKRVPDPAFKYPYELDTFQ KQAIIKLEENCNVFVAAHTSAGKTTVAEYAIALSQKHMTRAIYTSPIKALSNQKYRDFKQ TFDSVGLITGDLQINQTASCLIMTTEILQSMLYCASEVVRDLEYVIFDEVHYINNEDRGH VWEEVLILLPPNVSIVMLSATVPNTLEFADWVGRTKKRKVYVISTLKRPVPLQHYLYTGC GGKSRNDRFLIVDSDGKFKKDGWDKAVAAKSSNTKNPGEKKYQLNPNQEKTLWVGFIDHL KRENKLPVVAFTLSRNRCDTNAVALRSVDLTTATEKSRIRVFFQQCIMRLKEPDRELPQI VSMQKLLERGIGVHHSGILPFLKEIVELLFQSGVVKLLFATETFAMGVNMPARTVVFDSV RKFDGTESRTLHPAEYIQMAGRAGRRGLDDTGTVIILCKTDVPDAPVLQNMMLGKPQKLE SQFRMTYSMILNLRRVTESVTIEGMMRRSFKEVALIAHEKKYKAELEEVEKQLAESSELT ESQKQLGGFYSTASEYLDEWVKLRPLLLDTKKAAKHLTQGRILLISYREHHNKLAVLLAT IQRRQDTLYRVLTLTNVQQSNAEDDIRIEVPGSKVEKKEEKSDNWYKIIGFTRKELFIPE GVAGHEVLTISAPDILEITKQSIKVDFQLVISDWEKRQIPRFKNDPPGKTCQAAVQELLT ISLDAVTNREILEPFVEIKLNESSLVPRVKYLAALKKKLDSITCTDIANLEEQFEAVFKR KELETRRERLTFQLSHESLSLYPEYTNKVNVLRSLRYIDDDERVALKGRVALEMGTHELL VTELIFKNALTALQPAEIAALLSALVFQQKTNVELQLISPLKKGCEVMEEVQKSIALVEQ EHGVDPIEPLNFGLVQVVYEWARSEPFAKIMELTDVQEGIIVRCIQQLNEMLRYVKNAAV IIGDPVLKEKMEEASTAIKRDIVFAQSFYTQD NT seq 3699 nt NT seq  +upstreamnt  +downstreamnt atgaacacaagagtcaaggatttgtcagtcaacctgccgttcggccctccaccaattctc ccagacatcaggagcgttcttaaggaatatatcgagtgtcctgaacgcctgccgatccat gatgtggaaaaagttcaatgctactggcctcgagagccggacattcttgccctcctcaaa cacgacgtcgcgcctgttggaactaacttgaagtttgacagagatccgataaccggccgc atctctgacttgcgggaagttgttgttgaaggcgctggtgaaaacccgaggaactcgatg tctatgagccgtgctcctggtccgcctgcggaaggcgttagaggtagcgcgagcaatttt cccttttggcctggcgggtttgatataccagaactaccgaaggatgttgccagtgttgaa ataaactttgagagtaacctcaggacgctggccaagggattcaaatcaggaatcgaattt gctgcggataattgtatcccgagaaacattggcgatactctggaaagtcgtacgtctccg gctccagagccggagccagagcaggattccaatgcagaaacaataaacctcatggcgata gtacatgagcaggaaaatctgctgggattgtggtcgtcgccgggcgttaaacccagggat gagaatggcgatcagaagaaggaaattcaaaacggaaacttgctggtggatttggataaa gtgacgaatttgcaaccagagtgtaatctccctgttttgaaaataactgagaaagcaacg ttcaccaagacgtctaccgaatgggccgaagtgctggacgtctccgttcccgttgctgac tttgagaagcgtgttccagatccagcgtttaagtacccttacgaactagacacgttccag aaacaggcaatcataaagctggaggagaactgcaacgtttttgtcgccgctcacacttcc gcaggtaaaacgacagtggcggaatacgcaatagctttgagtcaaaagcacatgacgagg gcaatctatacatcgccgatcaaggcgctgtccaaccagaagtaccgtgacttcaaacag acgttcgacagcgtggggctgatcacaggggacttgcagattaaccagacagcttcctgt ctcatcatgacaaccgagattcttcagtccatgctctattgcgcgtctgaggtcgtcaga gacttggaatatgtgatattcgacgaagtccattacataaacaacgaggatcgcggtcac gtatgggaagaagtcttgatcctcctgccgccgaatgtgagcatcgtcatgctttctgca acagttccaaacactctggagttcgctgattgggttggaaggacaaaaaagaggaaagtg tacgtgatcagcaccctgaagcggccggtgccactgcaacattatctgtacactgggtgt ggaggaaagagcagaaacgatcgttttttgatcgttgattctgacggaaagtttaaaaag gatggatgggacaaagcagtcgctgccaaatcatcaaacacgaagaatcctggggaaaaa aagtatcagcttaatccgaatcaagagaagactctatgggtcgggttcatagatcacctg aaaagagaaaacaagctgcctgtcgtagctttcactctatctaggaatcgctgcgatacg aacgcggtcgcactgaggtccgtcgacctgacgacagcaacggagaaaagccgcatacga gtgtttttccagcagtgtatcatgcggttgaaagaaccggacagagaactgccacagata gttagcatgcagaagttgctggagcgtggaatcggtgtgcatcacagcgggattttaccc tttctcaaggaaatagttgagttactattccagagcggagtggtgaagctgctgttcgcg acagagactttcgccatgggagtgaacatgcctgcaagaactgtcgtctttgattctgtt cggaagtttgacggtactgagtcccgcaccctccatcccgccgagtacattcagatggcg ggaagggcgggacgccgaggtctggacgacaccggaacggtaataatcctgtgcaaaaca gacgtgccagacgctcctgtgctgcagaacatgatgcttgggaaaccgcagaagcttgag tcccagtttcggatgacttattcgatgatactgaacctgcggagggtgacggagtccgtg accatcgaggggatgatgcggaggtcgttcaaggaggtggcgctaattgcccatgagaag aagtacaaagccgagttggaggaggtcgaaaaacagctcgccgaatcgtcggagttgacg gagtcgcagaaacagctcgggggattttattcaacggccagtgagtacctcgacgagtgg gtcaagctcaggcctcttttgttagacacgaaaaaagccgctaagcacctgactcagggt agaattctgctgatatcatatcgcgagcatcacaacaaactggccgttcttctcgcaacg atacaacgaaggcaagacacgctttacagagttctaacattgactaacgtgcagcaatcc aacgccgaggatgatataaggatcgaagtgccaggttcaaaggtggagaagaaagaggaa aagtctgacaactggtacaagatcattggatttactagaaaggaattgtttattcccgaa ggtgttgctgggcacgaagttctgactatatcggcccctgatattttggaaattaccaaa cagagcatcaaggttgactttcagttggtcatcagcgactgggaaaaaaggcagatcccc cggttcaagaacgacccacccggaaaaacttgtcaagccgcggtccaggagcttcttact atatctctagatgctgtcacgaatcgcgagatactcgagccgttcgttgagataaaattg aacgagtcctcgcttgtgccgagggtgaagtacctggctgcattgaagaagaaactcgat agcataacttgcacagacatcgccaacctggaggaacaatttgaagctgtattcaagcgg aaggaattggagacaagaagggagagactaacctttcagctcagtcacgaaagtctctcg ctttaccctgagtacacaaataaagttaacgtccttaggtcgctgcgctatatagatgat gatgagagagtcgcacttaagggtcgggtggctttggaaatgggaactcacgaattactg gtaaccgagctcatcttcaaaaacgccctcaccgcgctgcagccggctgaaatagccgcc ctgctttcggctctggttttccagcagaaaaccaacgtggagctacagctgatatcgcct ctgaagaagggatgtgaagtgatggaggaggtccagaagagcatagcccttgtggaacaa gaacacggtgtcgacccgatcgagcctctgaacttcggccttgtacaggttgtctatgaa tgggcgaggtcagagccgtttgcgaaaataatggagctgaccgacgtccaggaaggtata atcgtcagatgcattcagcagctgaacgagatgctgaggtatgtgaagaacgcggctgta attattggcgacccagtactgaaagagaagatggaggaagcctcgactgccattaaacga gacatcgttttcgctcaatccttttatacacaggattaa

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