Diprion similis: 124414978
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Entry
124414978 CDS
T08947
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
dsm
Diprion similis
Pathway
dsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124414978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsm03400
]
124414978
DNA repair and recombination proteins [BR:
dsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124414978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
124414978
NCBI-ProteinID:
XP_046752135
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Position
14:complement(6957231..6972191)
Genome browser
AA seq
922 aa
AA seq
DB search
MAVQPNQQFNMDNATQQSFIRFFKNLPEKPSSTIRFFNRTDYYTLHGSDALFAAKEIYKS
TAGCKMLGAEPYKTEGLILSKSNFENFVRDLLLVKQYRVEVFVNQGSGKNQDWILEYKGS
PGNLVQFEDILFSNNDVAVSTSVMAVKLGGEAKNRIVGVSCVDSVERLISVCEFTDDDLF
SNLEALVISLGPKECLIIQGDGSQEFQTLKQLMERSNIMVTLRKKSDFSTDSIVQDMNTL
LNFKKGQQRNAQTLVEMNLKAAMAGTSAIIKYLELTSDEGNFNQFKVKQLEQSRFVRLDA
AAVRALSIEPRSDIPSGTSTGAPNSILNLLDRCRTPQGHRLISQWIRQPLRDIALIKERH
DIVEALVKDNELRSSLMEDHLRRVPDLQQLAKKLAKKKVTLQDCCRIYFCVSHLPVLAEQ
LSNLKYGAAMKAMIVDPLRELISDMDKYQQMIEQTIDLEAAEKGDYMVKPEFNNDLQELK
LKMNDLEEEIQGLINKVATDLSLEAGKVLKLESNQQFGYYFRITLKEEKSIRNKKGYTTI
DSNKSGVRFTNQKLTSLNEDFVSVRDQYFEEQKSVISEIINIAAGYTGPVHSIGSVSAQL
DVLTAFALASANAPRAYIRPEMCPSDVGELNLIQARHPCLELQEGVDFIANDVSFKKEEC
TFHIITGPNMGGKSTYIRTTGVVALLAHIGCFVPCDSAKISILDCILARVGADDSQTKGL
STFMTEMIETAAILRTATSNSLVIIDELGRGTSTYEGCGIAWAIADHLATELKPYCLFAT
HFHEITRLAEDVPTVKNLQVTAVVGDNKLTLLYRVKPGVCDQSFGIHVAKMANFPDDVVE
VAEKKLIELEDCQKVTFEGSDDPAVRRKIIKAGDELIANFAAKCKALDPSLTKPEIENKI
QLYKEEILSHNNPYINALLASP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcaaccaaatcaacagttcaacatggacaatgcgacgcaacagagctttatc
agattcttcaaaaatcttcctgaaaaaccatctagtacaatacgatttttcaataggaca
gattactatacgctacacggcagcgatgccttattcgcggctaaggagatttacaaaagt
acagctggctgcaagatgcttggcgccgagccatacaaaacggaaggattgatcctaagc
aagtccaactttgaaaactttgttcgtgacttgttgcttgtgaaacagtacagagtagaa
gtattcgttaatcaaggatcaggaaagaatcaggattggattctggaatacaaaggatct
ccagggaatttagttcaatttgaggatattttattcagcaataatgatgtcgcagttagt
acctcggttatggctgtgaaacttggtggtgaggcgaaaaataggatagtcggagtaagt
tgcgtcgattcagttgagcgtttaatatctgtttgcgaatttactgacgacgatttgttc
tcgaacctagaagcacttgtgatttccctcggaccaaaagaatgcttaataattcaaggg
gatggcagtcaagagtttcaaactttaaaacagttaatggaacgaagtaacatcatggtc
acactaaggaagaaaagtgatttttcaacggattcaattgttcaagacatgaacacgctt
ctgaacttcaagaaaggccagcaaagaaatgcccaaacgcttgtggaaatgaatttaaaa
gcggctatggcgggaacatcagcgattattaaatatcttgagttgacatcagacgaagga
aatttcaatcagttcaaggtgaaacagttggaacagtctagattcgtcagattagatgca
gcagcagtgagagcgctcagcattgaaccacgaagcgatattccttctgggacaagtaca
ggtgctccgaatagcatactgaatctcttggatcgatgcagaaccccgcaaggacacaga
ttgatatctcagtggattagacaaccgctgcgagatattgcattgatcaaagaacgacac
gatattgttgaagctttggtaaaagacaacgaattgaggtcctctctgatggaagatcat
ctgagacgtgtacccgatcttcagcagcttgcaaaaaagttggctaaaaagaaagtcact
ctacaggactgttgcagaatttacttttgcgtctcgcacttgccagtactcgccgagcaa
ttgtctaatctaaaatatggggcggcgatgaaagcaatgattgtagatccactcagagag
cttatttctgatatggataagtatcaacaaatgatagaacaaactattgatctggaagct
gcagagaagggtgattacatggtgaaaccagaatttaataacgatttgcaagagcttaag
ctgaaaatgaatgatttggaggaagaaatacaaggcctgatcaacaaagttgccacagac
ttatctcttgaagctggaaaagttctgaaattggaatcgaatcaacagttcggatattac
ttccgaataacgttgaaagaagaaaagtctatcaggaacaagaaaggctacacaactata
gattcgaacaaaagcggcgtgaggtttacaaaccaaaaactgacatctcttaacgaagac
ttcgtaagcgtcagggatcagtatttcgaagaacaaaaatctgtcatttcagaaatcatc
aacatcgcagccggatataccggaccagttcattccattggttctgtgtcagctcagctc
gacgtacttacagcctttgcattagcttcagctaatgctccgagagcttacattagacca
gaaatgtgtcccagtgatgtcggcgagttaaatcttatccaggcgaggcatccgtgccta
gaactccaggaaggggtggatttcatcgcaaacgatgtcagcttcaaaaaagaagaatgc
acctttcatataataactgggccaaatatgggcggaaaaagtacgtacattcgaacaaca
ggagttgttgctctgctagctcacattggctgttttgtgccttgtgacagtgcaaagatt
tcaatacttgattgtattttggcgagagtcggagccgatgattctcaaactaaaggactt
tctaccttcatgactgagatgattgaaacagcggctattttgaggaccgcaacctctaac
tctcttgtcataatcgacgaacttggtagaggaacttccacgtatgagggttgcggaata
gcttgggctatagccgatcatttggccacagaactcaaaccttactgcctcttcgctact
catttccacgaaataacgagactagcagaagatgtaccaacagtaaagaacctccaagtc
actgcagtcgttggagacaacaagctcactttactctatcgcgttaaaccaggtgtttgc
gaccaaagtttcggaatacatgttgctaaaatggcaaactttccagacgacgttgtggag
gtcgccgagaaaaaactgattgaattggaagattgtcaaaaagtgacttttgaaggctca
gacgacccagcagttagaagaaaaattataaaagctggagacgagctgatcgcgaatttt
gcagccaaatgcaaagcacttgatccatcattaacgaaaccagaaattgaaaacaaaatc
cagttatacaaggaagagatcctttctcacaacaatccttatataaatgcactgttggcg
agtccatga
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