Diprion similis: 124416529
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Entry
124416529 CDS
T08947
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124416529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124416529
03012 Translation factors [BR:
dsm03012
]
124416529
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124416529
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124416529
Translation factors [BR:
dsm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124416529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
AAA_22
NACHT
ATPase
ResIII
AAA_14
PhoH
Myosin_head
AAA_19
NPHP3_N
Sigma54_activat
NB-ARC
AAA_23
ATPase_2
ABC_tran
AAA_16
RsgA_GTPase
TsaE
Rad17
Motif
Other DBs
NCBI-GeneID:
124416529
NCBI-ProteinID:
XP_046753641
LinkDB
All DBs
Position
2:16176167..16182460
Genome browser
AA seq
985 aa
AA seq
DB search
MSYRHGRGARNAYGSYRQRESSEDTHDGSSHNAGNRQSRGSAQGSRGRGRGGHPPWLKGK
EIGLYYKKKSQSSQRPTHAIKLNPHIERKIKNLLESMPSTNFRPVSGTGMYDGIDSKLKA
RYDHINDSHFKKNFLEIVSGDIQQNLTKSMLAKSKLVQNDTYDKRAIEEHKERVASPGYQ
KMLKFREKLPAFKMRRQVLELIEKNQVVVISGETGCGKTTQVAQFILDDQIERGNGSVTK
IICTQPRRISAISVAERVAAERAERLGCSVGFQIRLEKELCRDYASILFCTTGMLLQFLH
SNPALTDWSHLILDEIHERSTESDFIITLLKQIIPRRPNLKVILMSATLNSDQFSKYYNN
CPNIHIPGFTYPVQEYYLEDVLQFTRFKFPPPPEMPNNHRKHMKRYKNQQKKSDDFLDFI
QPYLRHIESERKYPQFVIDQLRNPVSEDLSLELIAELVHFICTNEGPGAILIFLPGMTDI
TKLTRMLLESGEYPSSRFIVYPLHSRLPTVDQKLVFERPPDRVRKIIIATSIAETSITIE
DVVFVIDSGKMKLNKFDTDNNIETLLPEPVSLANAKQRRGRAGRVQPGKCYHLYTKAREM
TMDEYPLPEMLRTRLEQVILQAKILQLGKIKPFLASVIDPPNAKAVELSLQLLITLNALD
EDEQLTPLGYHLAKIPLDPRTGKMIILGAIFSCVEPVFSIAASLTYKDAFYCPLGKEAEA
QKRKLELGLGQYSDHIALAEALRRFEEAKTRGSPGFFCRQYFLSWNTLKLLTDMKSQFAK
YLCEMNFLHSANPNDERANRNSDNLALVKAVVCAGLFPNVAIVKSVRRHGASVVTPQDGK
VKLHPSSINEKCQSFPSPYLVYFTKQLSSAIYLHDTTSISPMGLIFAGPNSKIGEQNGKC
VMALPGALSFLCEPETAFIVQKLRAKLEWLLGYKITHPGTIKWDSDEGAVLKGMIELVSQ
GDEEMGLESRMYHVGFANETYSDSD
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcgacatggacgcggagcaagaaatgcatacggttcgtatcgtcaaagagag
agttccgaagatactcatgatggttctagccacaatgcaggaaatagacagagtcgcggg
tcggctcaaggaagccgaggtaggggacgcggcggtcatcctccgtggctaaaaggaaaa
gagatagggctttattacaagaaaaagtcacagagttcacagagaccgacgcatgccatt
aaattgaatccgcacattgaaagaaaaattaaaaacctgttagagtcgatgccaagtaca
aatttcaggccagtttctgggacaggaatgtacgatggtattgatagcaagctcaaggct
aggtatgatcacattaatgactcacatttcaaaaaaaatttcctggaaattgtgtctggc
gatattcaacaaaatctcacaaagtctatgcttgctaaatcaaagcttgtccaaaatgat
acttatgacaagagagcaatagaggaacacaaagaaagagtcgcgtcacccggttatcaa
aaaatgttgaagttcagggaaaaattacctgctttcaaaatgaggcggcaagtcttggag
ctcatagaaaagaatcaagttgtagtgataagtggtgaaactggttgtggcaaaacgacg
caggttgcccagttcattctagacgatcaaatcgaaagaggaaatggaagtgtcacaaaa
attatttgtactcaaccacggagaatatcggctatatccgtagctgaacgagtcgctgca
gagagagcagaaaggcttgggtgttccgttggctttcaaattagacttgagaaagaattg
tgcagagattatgcgagcatattgttttgtactacaggcatgttattacaatttttgcac
agtaacccagctttaactgattggtctcatttaattcttgacgaaattcatgaaaggagc
acagaaagtgactttattattacattgctgaaacagatcattccacggagacccaatctc
aaagtgattttgatgagcgctacactgaattctgatcagttttcaaagtattacaataac
tgtccgaatattcatataccaggttttacgtatcctgtgcaagaatattatttggaggat
gtactccagtttactcgattcaaattccccccgcctcctgagatgccaaataaccataga
aagcacatgaagaggtataagaatcagcaaaaaaaatcggatgatttcttagattttatt
caaccatatttacggcatatcgagtctgagagaaaatacccgcaatttgttatcgaccaa
cttagaaatccagtgagcgaagatttatcactcgaacttattgcggaactggttcacttt
atatgtacaaacgaaggtccaggtgccattctgatatttttaccaggaatgactgatatt
accaaattaacaagaatgctactcgaatctggagagtatccatcaagtaggtttatagtt
taccctttgcattcacgcctgccaacagtggatcagaaacttgtatttgaaagacctcca
gatcgcgtgagaaagataataatagcaacatcaattgctgaaacgtccataacaatagaa
gatgttgtgtttgttatcgattctggtaaaatgaaattgaataaattcgacaccgataac
aatatagaaacgttattgccagaacccgtctctttggccaatgccaaacaaagacgtggg
agagctggaagagttcaacctggcaaatgttatcacttatatacaaaagcgcgagaaatg
acaatggacgagtatcccttaccagaaatgttacgaacaagattagaacaagttatactt
caggcaaaaattttacagcttggtaaaataaagccatttttagcaagtgtaatagatcct
ccaaatgcaaaagctgtcgaactatctcttcagctactcattactctaaatgctcttgat
gaagatgaacagttaacacctctaggatatcatttggcaaaaataccactcgaccccaga
acaggaaaaatgataatattgggagcaattttttcatgtgtcgaaccagtattttcaatc
gctgctagtctgacttataaagacgcgttttattgtcctttgggaaaagaggctgaggct
caaaaacggaaattggaacttggcttaggtcagtacagcgatcacattgcacttgcagag
gctctcaggcggtttgaagaagcaaaaaccagggggtctccaggattcttttgtagacag
tattttctttcctggaacactctcaagcttttaacagacatgaagagtcagttcgccaag
tatctgtgcgagatgaactttcttcacagtgcaaatcctaatgatgaacgtgcaaacaga
aattcagataacttggcactggttaaagctgtggtttgtgccggactttttccgaacgta
gctattgttaagtcagtcagaagacacggcgcaagcgttgttactccccaagatggcaaa
gtcaagcttcacccttcgagtataaacgaaaaatgtcaatcctttcccagcccttatttg
gtttacttcaccaagcagctatcctcagctatttatctgcacgacactacgagtattagc
cctatgggtttgatatttgcaggtccaaatagtaaaataggagaacagaatggaaaatgt
gttatggcactaccaggtgccctcagctttttatgtgaaccggaaactgcgttcattgtt
cagaaattacgcgccaagctggaatggctgctgggatataaaatcactcatccagggacg
ataaaatgggacagtgacgaaggggcggtcttgaaaggtatgatcgagcttgtatcgcag
ggcgatgaggagatggggctagaatctcgtatgtaccacgtgggatttgccaatgagaca
tactcagattctgattga
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