KEGG   Diprion similis: 124416620
Entry
124416620         CDS       T08947                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
dsm  Diprion similis
Pathway
dsm03030  DNA replication
dsm03410  Base excision repair
dsm03420  Nucleotide excision repair
dsm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124416620
   03410 Base excision repair
    124416620
   03420 Nucleotide excision repair
    124416620
   03430 Mismatch repair
    124416620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dsm03032]
    124416620
   03400 DNA repair and recombination proteins [BR:dsm03400]
    124416620
DNA replication proteins [BR:dsm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124416620
DNA repair and recombination proteins [BR:dsm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124416620
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_22 Rad17 BRCT_2 AAA_14 PTCB-BRCT AAA_assoc_2 AAA_30 AAA_16 RuvB_N RNA_helicase NTPase_1 AAA_5 nSTAND3 AAA_18 AAA_19 AAA_7 AAA_33 Gp44_lid
Other DBs
NCBI-GeneID: 124416620
NCBI-ProteinID: XP_046753824
LinkDB
Position
1:1014505..1019742
AA seq 1100 aa
MSKAITSYFQVISSKKGTDSSSVSNNKKKRHQVSDEDREKSVSPPKRHKPTKRSSKHRVL
SDSDCEDIEAKEKPRKGKSSDREKTRGEKGATGSKTSPRTPEPVKRKKKRHVLSDSEDEV
TVVKEKSKKAQYAEKEKLPRKKVATAADVFGNKPVKRIEAPKPSKKLVEEDDDFFCDDKL
EAVLDQLATDDTEPDRKAETSTKKNRNDNRKKQSNGNESVEAGSSKEGSRNSKTTKSSEK
TMDDTITDINGVGHAPKKTKRNLVKQESNDDEKEKGSDNSPEIETSKFFEVPTNNKKIIK
DATYKKGISKIEIDKTAGQKRKRSNEDDDPDPYEALIQKKKHNSALYHQYLHRGGARNPG
SKEIPTGANNCLAGLSFLITGVLDSLERDEADDMIKKYGGRMLHQVSKKTDYVILGDEPG
PAKLEKAKKLGVKIISEDELLELIRTRPAGQGASLTADKHHTNKAKKLPSKVKGKSPEPE
SLTSSEPLSAETSSSSKLNSEVSDIKPKTFIPDGSATVQSSEVLKSSNAPSMVRVSCETE
SQVWVEKYKPKNMKQIIGQQGDKSNAHKLYNWLKNWQKNHSGDVKLTRPSPWAQHDGSFF
KAALLSGPPGVGKTTSVQIVCNALNLDAIEFNASDTRSKRLLKEEVSELLNNKSMRSYFV
DGNSKKPDLDHVLVMDEVDGMAGNEDRGGLQELIALIKTTSVPVICICNDRNHPKMRTLS
NYTFDLKFQKPRMDQIRSAMLSICFKEKIEISKDDLSRLIESTNCDVRQVLNHLSLLANN
SSIDEVSKTRKCNKDLRLGPWDVVQKVFTFEAHKTMSIHDKSDLFFHDYNIAPLFVQENY
LGVTPNCPKDKLLETVADAAESLVLGDLVENSIRRNGAWTLLPMQACYSSVIPGTLMAGN
ITRQIMFPSWLGQNSKRGKFDRLLQEITMHTRLATSSSKDAINLDYLKHLRDAVVKPLVL
NGAEGTATALDVMNYYHLLREDLDSLTEVSLWPGQHDPMQALESKVKAAFTRAFNKSAIM
RPYAFTKGAEKKKRAQSVYSEDALELGEEEEASEEDEDTPAANVKTKAKKTPAADKKTAG
TSGVKKKSSNPRAGKSKANK
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgagtaaggcgataacatcctattttcaagtgatttcttcaaaaaaaggcaccgacagc
tcctctgtatcaaataataagaagaaaagacatcaggtctcagatgaagacagggaaaaa
tccgtgtctccgcctaaacggcataagcctacaaaacgaagtagtaagcatcgtgtctta
tcagattcggattgtgaagatatagaagccaaagaaaaaccacggaagggaaaatcttct
gacagggaaaaaacacggggtgaaaaaggcgccacaggttcaaaaacttccccaagaaca
ccagagcctgtgaagcggaagaaaaaacgacatgtcttatcagattcagaagacgaagtg
acagtagtcaaggaaaaatcgaaaaaggcacaatatgccgaaaaggaaaaacttccacgg
aaaaaggttgccacagcagctgatgtgttcggtaacaagccagtcaaaagaatcgaagca
ccgaaaccatctaaaaaactggtggaagaggatgatgatttcttttgcgacgataaactc
gaggctgtgctggatcagttagcaacagacgatactgagccagatcgcaaagcagaaacc
agtaccaaaaaaaatcgaaatgataatcgcaaaaaacagtctaacgggaatgagtccgtt
gaagctgggtctagcaaggaaggaagtaggaatagcaagaccaccaagtctagtgaaaaa
actatggatgatacaataactgatatcaatggagttggtcatgctccaaaaaagactaag
cgtaaccttgtgaagcaggaatcaaatgacgacgagaaagaaaagggcagtgacaatagt
cctgaaattgagaccagcaagttcttcgaagtacccaccaataacaaaaaaataataaag
gatgcaacatataagaagggaatatcaaaaattgagatagacaagacagccggacaaaaa
cgtaagcgcagtaatgaggacgatgaccctgatccctatgaggcattgattcaaaagaag
aagcacaattccgctttatatcaccagtatctacatagaggtggtgctagaaacccaggc
tctaaagaaataccaacgggggcaaacaattgcctagctggtctaagtttcctgataaca
ggagttttggattcattggaaagagacgaggcggatgatatgataaaaaaatatggagga
cgtatgttacatcaagtttcaaaaaagacagactatgtaatactgggtgatgaaccagga
ccagcaaaattggaaaaggctaaaaaacttggagttaaaataatatccgaggatgaactg
ttggaactaattcgaacacgccctgcgggtcagggagcttcattaacagctgacaaacat
catactaataaagcaaaaaagttacctagcaaagtgaaaggaaaatcaccggaacctgaa
tctctgacatcttcagaacctctttctgcagagactagtagctcatcaaaacttaattca
gaagtctctgacatcaagccaaaaacgttcatacctgatggttcggctactgtacagtcg
tcggaagttttgaagtcaagcaacgcaccttcaatggttcgtgtatcttgtgaaactgaa
tctcaagtttgggtagagaagtacaagccaaaaaatatgaagcaaattatcggtcaacaa
ggagataaaagcaatgcgcacaagctttacaattggttaaaaaattggcaaaagaatcac
agtggagacgtcaagttgactcgacctagtccctgggcacaacatgatggatcatttttc
aaggctgctctcttatctggcccaccaggagttggaaagactacatcggtacagattgtt
tgcaatgctctaaacctggatgctatagaattcaatgcttctgatactcggagcaaaaga
ctcttgaaagaagaagtctctgagttactcaataacaaatccatgaggagctattttgtt
gatggtaattctaagaaaccagatttggatcacgttctggtgatggatgaagttgatgga
atggctggtaatgaagaccgaggtggtctgcaggaactgattgctctgattaaaactaca
agtgtacctgtgatttgtatttgtaatgatagaaaccatcctaagatgagaactctgtca
aattacacgtttgacctcaaatttcagaagcctagaatggaccaaattaggtctgcaatg
ttgtcaatatgcttcaaagagaaaattgaaatctccaaggatgaccttagccggttgatc
gaatctactaattgtgatgttcgacaagttttgaatcatttgtcgctcttagcaaataat
tcttcaatcgacgaagtgtctaaaacaaggaaatgcaacaaggatttacgtttgggtcct
tgggatgttgttcaaaaagttttcactttcgaggcacacaaaactatgtcgatacacgac
aagagcgatctctttttccatgattacaatatcgcacctctttttgtccaggagaattac
ctgggtgtaacaccaaactgtcccaaagacaagttgttagaaaccgtagcagatgcggca
gaaagcttggttttaggagatttggttgaaaattcaattcgccgaaatggggcctggaca
ttattgccaatgcaggcttgctactcttccgtaattcccggcacgttaatggccggtaac
ataacgcggcaaatcatgtttccttcttggcttggtcagaattctaagagaggaaaattt
gacagattacttcaagaaatcactatgcacacgcgactggcaacatcgtcgagcaaagat
gcgataaatttggattatctgaagcatttgagagacgcggtagtcaaacctttagtcctc
aatggtgcagaaggtactgcgacggcactggatgtgatgaactactatcacttactcagg
gaggacttagattcactaactgaggtctcgttgtggccgggacagcatgacccaatgcag
gcactggagagtaaggtcaaagcagccttcacgagagcgtttaacaagagtgccattatg
agaccatacgcttttaccaaaggcgctgaaaaaaagaaacgagctcaatccgtgtacagc
gaagatgctttagaattaggagaagaagaggaggcatcagaagaagacgaggatactcct
gccgcaaacgtaaagaccaaggcgaagaaaacacctgccgccgataagaaaacggctggg
acttcgggagtgaagaaaaagagtagcaacccacgcgcgggaaagtcaaaggcgaataaa
tag

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