Diprion similis: 124416813
Help
Entry
124416813 CDS
T08947
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dsm
Diprion similis
Pathway
dsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124416813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsm03019
]
124416813
03036 Chromosome and associated proteins [BR:
dsm03036
]
124416813
Enzymes [BR:
dsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124416813
Messenger RNA biogenesis [BR:
dsm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124416813
mRNA degradation factors
5'-3' decay
Decapping complex
124416813
Chromosome and associated proteins [BR:
dsm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124416813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
124416813
NCBI-ProteinID:
XP_046754120
LinkDB
All DBs
Position
3:13040715..13047436
Genome browser
AA seq
444 aa
AA seq
DB search
MMTETHINSNHMLNSGLGPKGDLEKMDDIGWKAKLKIPPKDKRIKTSDVTDTRGNEFEEF
CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYSIPVLEQVDPR
KDVIQALVIVPTRELALQTSQICIELAKHMDVKVMVTTGGTNLRDDIMRIYQKVQVIIAT
PGRILDLMDKNVANMDHCRILVLDEADKLLSQDFKGMLDHVISRLPQERQILLYSATFPL
TVKQFMEKHLRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQITQSIIFCN
STQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDVQA
VNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKPIPK
VIDPSLYVARLEENSIMEEGNISK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaactcatattaattctaatcacatgctgaattccggcttgggtccgaaa
ggtgatctagagaagatggacgatataggttggaaagcaaaactgaaaattccgcccaaa
gacaaacgcatcaaaacaagtgatgttacggacacacgtggcaacgaattcgaagaattc
tgcttaaagcgtgaattgttgatgggaatttttgagaaggggtgggaaaagccgtcccca
atacaagaagcaagtatccccatagctctttctggcaaagatgtacttgcacgagctaaa
aatggcacaggcaagactggtgcatattcaatccctgtattagaacaggtggatccacgt
aaagatgttattcaagcattagtgatagttcctactagagaattggcactgcagacatca
cagatatgcattgaacttgcaaaacacatggacgtcaaggtcatggttaccactggagga
actaatctgcgcgacgacattatgaggatttaccaaaaggtgcaagtaatcattgcgaca
ccgggacgtatcctcgatcttatggataaaaatgttgcaaatatggatcactgtagaatc
ctcgtattggatgaagctgacaagcttctatctcaagactttaaagggatgctggatcat
gttatatccagattaccacaagaacgtcagattctattatactctgctacatttcccctg
acagtaaagcaattcatggaaaagcatctaagggatccatatgaaattaatctgatggaa
gagttgacattgaaaggagtgacacaatattatgcttttgtacaggaacgtcaaaaagtt
cactgccttaatacgctattttctaagttacaaattacacagagcataatattctgcaat
tcaacacaacgcgttgaattactcgctaagaaaataacagatctcggctactgctgttat
tacatacatgcgaaaatggcccaggcacaccgaaatcgagtctttcatgatttccgcgct
ggactctgccggaacctggtttgtagtgatctgttcacgcgtggaattgacgtgcaagct
gtgaatgttgtaataaactttgactttccgaagatggcggaaacgtatttgcatcgtatt
ggacgttcaggtagatttggacacttaggtattgcgatcaacctcataacttacgaagat
cgctttgccttgcaccgcatagaacaagagcttggaaccgagataaagccaattccaaag
gtgattgatccaagcttgtacgtcgcacgattggaagagaatagcattatggaagaagga
aacatatccaagtag
DBGET
integrated database retrieval system