Dyadobacter sandarakinus: HWI92_02840
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Entry
HWI92_02840 CDS
T07768
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dsn
Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsn03032
]
HWI92_02840 (topA)
03400 DNA repair and recombination proteins [BR:
dsn03400
]
HWI92_02840 (topA)
Enzymes [BR:
dsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HWI92_02840 (topA)
DNA replication proteins [BR:
dsn03032
]
Prokaryotic type
DNA Topoisomerases
HWI92_02840 (topA)
DNA repair and recombination proteins [BR:
dsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HWI92_02840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QRQ99926
LinkDB
All DBs
Position
complement(718619..721051)
Genome browser
AA seq
810 aa
AA seq
DB search
MSKNLVIVESPAKAKTIENYLGQDFTVKSSFGHVRDLPEHDMGVDVEHGFQPSYEISSDK
VKVISELKKLAKDAEVWLATDDDREGEAISWHLKEALGLPDDTKRIVFREITKSALQNAI
ARPRTIDADLVDAQQARRILDRLVGYELSPVLWKKIRIGKQNLSAGRVQSVAVRIIVERE
REIDAFKSKSSYKITARFDLGNGKILNAELPRNFTTEDEAVKFLERCVGAQFSIKNLEVK
PAKKTPAPPFTTSTLQQEASRKLSFSVAQTMSVAQRLYEAGKISYMRTDSTNLSEEALDK
AKQQITREYGQDFHHRRIFKTKSESAQEAHEAIRPTDFSTLQGSSDRNEQRLYELIWKRA
IASQMSDAQLERTTATIGISTTNEELVAQGEVIKFEGFLKVYMESSDEEGDEEQKGMLPP
LNISQILNLADMKATERFTRNPPRYTEASLVKKLEEMGIGRPSTYAPTISTILKREYIVK
EDRPGTEREFKEFTLASDQIKSKVNKEIYGSEKSKLFPTSAGMVVNDFLVSHFNDIIDYS
FTANVEKDFDHIAEGSLAWRQMIKNFYTPFQKKIAEVKEEAFDKSLTSRDLGEDPATGKK
VSVRIGKYGPYVQIGDVEDEEKPRFASLQKGQLMESITLDEAFELFKLPRQVGFYEDKDL
VVNVGKFGPYVKHDGKYYSLARTDDPMAVTEERLIQIITEKRVAELSRTIKEFSEDADVK
VLNGKYGPYIAFGKKNVKIPKGTEPGALTYEEVVKLAAETPDKPAGRGAARKPAAKAAPK
EPAAKSPAAKTAAKSAAAKKPAAKKAAGKS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaatctggtgatcgtagagtcaccggcgaaggccaaaaccattgagaactat
ctaggacaggatttcaccgtaaaatcgagcttcgggcacgttcgtgaccttccggagcat
gatatgggggtggatgtggaacatggttttcagccctcgtacgagatctcttccgataaa
gttaaggtgatatccgagcttaaaaagctcgccaaagatgccgaagtgtggctggcgacg
gatgatgaccgcgagggcgaagccatctcgtggcacctgaaagaagcattgggactaccc
gatgataccaagcggattgtgttcagggaaatcaccaaatcagcgctgcagaatgccata
gccaggccccggaccattgatgccgacctggtggatgcacagcaggcgcgccggattctg
gaccgcctggtaggatacgaactttcgcccgtcctctggaagaaaatccggattggaaaa
caaaacctttctgccggccgtgtacaatctgtagcagtacggattattgtagaaagagag
cgtgagatcgatgctttcaaaagcaaaagcagctacaagatcacagcacggtttgacctg
ggaaatggcaagatcctgaatgccgagcttccgcgtaatttcacgaccgaagacgaggct
gtcaaattcctggaaaggtgcgtgggtgctcagttttctatcaaaaacctggaagtaaaa
cctgctaaaaaaacccctgcacccccttttacgacttctaccctgcaacaggaagcatcc
cgtaagctgagcttttcggtggcacagaccatgagcgtagcccagcggctgtacgaagcc
ggtaagatctcctatatgcgtaccgactctacaaacctgtcggaagaggcactcgataag
gccaagcagcagatcacccgcgagtatggccaggatttccaccaccgccggattttcaag
accaagtcagaatccgcgcaggaagcgcacgaagccatcaggcctaccgacttttcgacc
ctgcagggcagcagcgaccgcaacgagcagcgtctgtatgagctgatctggaagcgcgcg
atcgcctcgcagatgtctgatgcacagctcgaacgcacgacggcgacgatcggcatttcg
accacgaacgaggagcttgtggcgcaaggcgaggtgatcaagtttgagggctttctgaaa
gtgtacatggagtcaagtgatgaggagggggatgaggaacaaaaaggaatgctgcctccg
ctgaacatcagccagatactcaacctggcagatatgaaagctacggaacgttttacgcgt
aacccgccgcgctatacggaagcgagtctggtcaagaaactggaagaaatggggatcgga
cgtccgtccacctatgcacccacgatttccacgatcctgaaaagggagtatattgttaag
gaagacaggccgggtacagaaagggaatttaaagaattcaccctggcatctgatcagatc
aagagcaaggtcaacaaggaaatatacggttctgagaaatcgaagcttttcccgacaagt
gcgggaatggtggtgaatgattttctggtaagccactttaatgatatcattgattactcc
tttacggccaatgtcgaaaaagactttgaccatatagcagaaggtagcctggcgtggcgt
cagatgatcaaaaacttttatactccgtttcagaaaaaaatagcggaggtaaaagaagaa
gcatttgacaaaagcctgacctcccgagacctgggcgaagatcccgccactggcaaaaaa
gtgtctgtgcgaatcggaaagtatggtccttatgtgcagatcggtgatgtggaagacgaa
gaaaagccacgattcgccagcctgcagaaaggtcagctcatggaatccatcaccctggat
gaggcatttgagcttttcaagctgcctcggcaggtgggcttttatgaggataaagatctg
gttgtcaatgtgggtaagttcggaccttacgtaaagcacgacggaaagtattattccctg
gcgcgtaccgacgatccgatggcggttacggaagagcggcttatccagatcatcactgaa
aagcgggtagcggaactcagccgcactatcaaggaattcagtgaagatgctgatgtaaag
gtacttaatggaaaatacggtccttatatcgcatttggtaaaaagaatgtaaaaatcccg
aaaggtaccgagccgggagccctcacctatgaggaggtggtgaagctcgccgccgaaaca
cccgataagccggcaggtcgtggcgctgcccgcaagccggctgcaaaggctgccccgaaa
gagcctgctgcaaaatctccggctgccaaaactgccgcaaaatccgctgctgccaagaag
ccggcagcgaagaaagccgcaggcaaaagctga
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