Dyadobacter sandarakinus: HWI92_05540
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Entry
HWI92_05540 CDS
T07768
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn03030
DNA replication
dsn03410
Base excision repair
dsn03420
Nucleotide excision repair
dsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWI92_05540 (polA)
03410 Base excision repair
HWI92_05540 (polA)
03420 Nucleotide excision repair
HWI92_05540 (polA)
03440 Homologous recombination
HWI92_05540 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsn03032
]
HWI92_05540 (polA)
03400 DNA repair and recombination proteins [BR:
dsn03400
]
HWI92_05540 (polA)
Enzymes [BR:
dsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWI92_05540 (polA)
DNA replication proteins [BR:
dsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HWI92_05540 (polA)
DNA repair and recombination proteins [BR:
dsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HWI92_05540 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWI92_05540 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
RecR_HhH
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QRR00408
LinkDB
All DBs
Position
complement(1382023..1384902)
Genome browser
AA seq
959 aa
AA seq
DB search
MDKPVHKLFLLDAMALIYRAHFAFIKTPRITSKGLNTSAVFGFANTLLEVLQKEKPTHIG
VAFDTSAPTFRHIQFEAYKAQRQEQPEDITVAVPLVKRLLDAMCIPTLVMDGYEADDIIG
TIAKEAGQAGFEVFMMTPDKDYGQLVEQHIHIYKPAFMGKGPEVLGVQQILDRWQIRRID
QVIDILGLMGDAVDNIPGIPGVGEKTAQKLIQEYDSIENLITHVDEIKGKLGEKIRENID
MAVMSKQLATIDTRVPVVFDAEDLTVCAGNADKIVALFDELEFKTLKQRVLGIGAPAPAA
KVSIPGASGPAAQGQLDLFGNPTQEVGKQPAIVSEGIADDDAPEQAFEDLRLPTTRRTID
NTFHRYHTVDTPELMKSLAYYLSIQDAFCFDTETTSLDTIDAELVGLSFSYLPGEAFYVP
VPANRDQALEILANFREVFENERIEKIGQNLKYDILVLRNYDIEVHGTLSDTMLAHYLLE
PDKRHGMDILAGSYLNYEPVSITSLIGKKGVKQGTMRDVRIPEITQYAGEDADITLQLNT
IFSRELPKVKASKLFREVEMPLLKVLAAMESTGVRLDIDALRDMSAVLENDLRQAESEIY
EAAGQSFNISSPKQLGEVLFEKMKLIDKPKKTKTGQYATGEDILSDLENNHVIARRILDY
RELQKLKSTYVDALPLLVSRRTGRIHTSYNQAVAATGRLSSTNPNLQNIPIRTPRGREIR
KAFVPDNDDFQILSADYSQIELRIMAAFSGDTSMIEAFNQGRDIHATTASKVFQVALDEV
TSDMRRKSKMVNFGIIYGISAFGLAQRLAIPRGEAAEIIRAYFEEFSSVKGYMDKVINDA
REKEYVETILGRRRYLPDINSRNMTNRGYAERNAINAPIQGSAADMIKVAMINIHDFMKA
EKLKSRMILQVHDELVFDAHRDEIPLLKSKVDELMRTAIPLPVKMETGIGIGANWLEAH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaccggttcacaaactctttctgctcgatgcgatggcgctgatttaccgggcg
cattttgcttttataaaaacccccagaattacttcaaaaggcttgaacacgagtgccgtg
ttcgggtttgccaataccttgctggaagtactgcaaaaagaaaaacccacgcacatcggt
gtggcatttgatacttcggcacctactttccggcatatccagtttgaagcgtataaggct
cagcggcaggagcaacccgaggatattaccgtagcagttccactggtaaagcggctgctc
gacgccatgtgcattcccacactcgtgatggatggttacgaggccgacgatataatcggt
accatcgccaaagaagccgggcaggccggattcgaggttttcatgatgacaccggataag
gattacggccaactggtggagcagcacatccatatttataagcctgcgttcatgggcaaa
ggtcccgaggtactcggcgtacagcagatcctcgaccgctggcagatccgccgcattgac
caggtgattgacatactcggactgatgggcgatgccgtggacaacattcccggcatcccg
ggcgtgggcgaaaagactgcgcaaaagcttatccaggaatatgactccattgaaaacctg
atcacccacgttgacgaaatcaagggaaagctgggcgagaagatccgtgagaacatcgac
atggctgtaatgagcaagcagctcgcaaccattgacacccgggtgcccgtcgtgtttgat
gccgaagacctgacggtttgtgcaggaaatgcagacaaaatcgtggcactctttgatgag
ctcgaattcaagacgctcaaacagcgcgtgctgggtattggcgcgcctgctccggcagcc
aaagtcagcatccccggcgcttccggtccggcagcccaaggccagctcgacctttttggg
aaccccactcaggaagtcggaaagcagccggcaatcgtgagcgaaggcattgcggacgat
gatgcgccggaacaggcttttgaagacctccgcctgccgacaacccgccgcacgattgac
aatacatttcaccggtatcataccgtggacacgcctgaactgatgaaaagcctggcttac
tacctcagcattcaggatgcgttttgctttgataccgaaacaacctcgctggacaccatt
gacgcggaacttgtggggctgtcattttcctacctgcccggcgaagccttctacgtgccg
gtaccggccaaccgggatcaggcattggagatcctcgccaacttccgcgaggttttcgaa
aatgagcggatcgaaaaaatcggtcagaacctgaaatatgatattctggtactgcgcaac
tacgacattgaggtgcatggcacgctaagtgataccatgctggcacattacctgcttgaa
cctgacaaacgccacggtatggatatcctggccggatcgtacctgaactacgagcccgtt
tccattacttccctgatcggcaaaaaaggtgtgaagcagggtaccatgcgcgatgtgcgt
attccggaaattacccagtatgcaggggaagatgccgacattaccttgcagctcaacacc
atattttcgcgcgagctgcccaaagtaaaagcctcaaagcttttcagggaggtggaaatg
ccgctcctgaaagtacttgcggcgatggaaagtaccggtgtacggctggacattgatgca
ttgcgggacatgtcggcggtacttgaaaacgatctccggcaggcggaatcagagatctac
gaggccgcaggtcagtctttcaacatcagctcacccaagcagcttggggaagtgcttttt
gaaaagatgaagcttattgataaacccaaaaagaccaaaacgggccaatatgcaaccggg
gaagacattctgtcggacctggaaaacaaccatgtaattgcgcggagaatacttgattac
cgagagctgcaaaagttgaaatcgacatacgtggacgcccttccgctgctggtcagcagg
cgtacgggccgcattcacacgtcctataaccaggctgtggccgccacgggccgtctcagc
tctaccaaccccaatctgcagaatatcccgatccgtacgccgcggggccgggaaatccgc
aaggcatttgtgcccgacaatgatgattttcagattctctcggccgactactcacaaatt
gagctgcggatcatggcggcattcagtggcgatacaagtatgatcgaagccttcaaccag
ggccgcgacatccatgcgactacggccagcaaggtctttcaggtagctttggatgaagtg
acttccgatatgcggcgaaaatccaaaatggtgaacttcgggattatttacgggatttcg
gctttcggcctggcccaaaggctggcgatcccgcgcggggaagccgctgaaatcatcagg
gcatacttcgaggaattctcatcggtgaaaggttatatggacaaagtcatcaacgatgcg
cgtgaaaaggaatatgtggaaaccatcctgggccgccgccgctaccttcccgacatcaac
tcccgcaacatgacgaaccgcggttatgccgagcgcaacgccatcaatgccccgatccag
ggctctgcggcagatatgatcaaggtagcgatgatcaatatccacgactttatgaaagct
gaaaaactgaaatcgagaatgatcctgcaggtgcatgacgaactcgtttttgacgcgcac
cgggacgaaatcccgctgctcaaatcgaaggtggacgagctgatgcgcactgccattccg
ctgccggtaaagatggaaaccggtatcgggattggtgccaactggcttgaagcacattga
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