Dyadobacter sandarakinus: HWI92_05685
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Entry
HWI92_05685 CDS
T07768
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn03030
DNA replication
dsn03430
Mismatch repair
dsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWI92_05685 (holA)
03430 Mismatch repair
HWI92_05685 (holA)
03440 Homologous recombination
HWI92_05685 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsn03032
]
HWI92_05685 (holA)
03400 DNA repair and recombination proteins [BR:
dsn03400
]
HWI92_05685 (holA)
Enzymes [BR:
dsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWI92_05685 (holA)
DNA replication proteins [BR:
dsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HWI92_05685 (holA)
DNA repair and recombination proteins [BR:
dsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HWI92_05685 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Arnt_C
Motif
Other DBs
NCBI-ProteinID:
QRR00433
LinkDB
All DBs
Position
1421839..1422858
Genome browser
AA seq
339 aa
AA seq
DB search
MSQTPETVLKDIRNKRYKPLYLLHGDEPFYIDSIAEELEKRIVPESEKGFNQFVLYGKDT
DVAGVLSYARRFPFMSERQLIIVKDANKLAGIDQKEQQARLEDYALNPLQSTVLVLCFNA
AADERRSYVKAFDKHGVAVPSKKMYDNKLPEWVTGFCQSEGVKVSPKAVQMLVDNIGNDL
KRLANEIRKIMVNLRVDEGIDASAVERFVGISKEYNVFEFQKALMTRDVLKANRIASYFS
SNPKDNPLTPILIILFGFFSKVLLVHASKDKSEKVLASELSVNPYFVKDYLAAARNYPLH
KAADIVHFLRDTDARMKGVDGVSIPEGELLKELVFKILH
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacacccgaaactgttctgaaagatatacgaaacaagcgttataaacccctg
tacctgttgcatggtgacgagcctttttacattgactccattgcggaagaacttgaaaaa
aggatcgttccggaatctgaaaagggctttaatcaatttgtgctctacggaaaggatacc
gacgtggccggcgtactaagctatgcccggcggtttccgtttatgtccgagcgccagctc
atcattgtcaaggatgctaacaaactggcaggtattgatcagaaagagcagcaggcacgc
ctggaagattatgcattaaacccgcttcaaagtaccgtcctggtactttgcttcaatgca
gcagcggatgagcggcggtcgtatgtgaaagcttttgataaacatggcgtagcagtacct
tccaagaaaatgtacgacaacaagctgcctgagtgggttacaggcttttgccagagtgaa
ggggtgaaagtgagcccgaaagccgtacagatgctggttgataacattggtaacgatctg
aaaaggctggctaatgagatccggaagattatggtgaacctgcgggtagacgaggggatt
gatgcctcagccgtagagcggtttgtcggcatcagcaaggagtacaatgtatttgaattt
caaaaagcattgatgacccgggacgtgctgaaagcaaaccgcatagcttcttatttttcg
tcaaatcccaaagacaacccgcttacgcccatcctgattattttgttcgggtttttttcg
aaagtattgctggtacacgcaagcaaggacaaatctgaaaaggtgctggcctcggaactg
tctgtaaacccatatttcgtgaaggattacctcgctgctgcccggaattatccgctgcat
aaggctgcggatatcgttcattttctgagagatactgatgctcgtatgaaaggtgtggac
ggtgtgtccatccccgagggagagctgctgaaagaactcgtttttaagatcctacattaa
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