Dyadobacter sandarakinus: HWI92_07995
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Entry
HWI92_07995 CDS
T07768
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
dsn
Dyadobacter sandarakinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Por_Secre_tail
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-ProteinID:
QRR00854
LinkDB
All DBs
Position
2018166..2022518
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AA seq
1450 aa
AA seq
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MTPIFLKKLSTSLKLYLLVFIGLTCVQFAEAQPPSAFTYPSPVAYVANVSNVFISPTVSG
TVARYSMPASPALPAGLTFDPNTGVISGVPTEALPTTVYTVTATNQNGSISTTFTMTVTN
NYLNNNNNQLHFGGAGVIISHPNGTSSGQVAGDITLYQNVTNINGQAIDCIITTKEVNNV
TSWTSYDQPEVSGSSFNSNLPDFFSPQVSFGTNGGNVSYEFQFIFGGTYNSTTRAGQNVV
LQNVKLNTYDIDGNGTAGALQYNEFSGFTSSELGTSPTVQALYNTVSGLTRFVSTSSANS
TMVTAAATRIRVTYANMSNFSIVVGSQGAGLAFFFLDLSVGPTFTSVTTSSPSVDLNTSI
VGVGNEGAGCAGSLPLTRPSQTNINAQGSLTGMEVSYPASDIRDGAAELLTAAGATGSNV
LSLGFTTGSSGTLTIGGVTFNYTKSVSGVQGAATNKIAFTRSTGGTTFTSAEAETLLDAL
QYSNTAANPTIGDRHLSVLVYNAVFKSPSAMFSATVNCVTLAGHIFKDQNGLLGTTDFNT
ISANATTGQFAAGAAYAVVVDPATNQVIESRAIAAGGAFNFGTVTPGSYFLYVSATAPAA
GSVFTQATFPSGYVSAGENLSAAPGSDLLNDGKLIVTVGTTPVTNANFGLNSPPTANPLN
AAALQNPGGTQRVVVPALTGNDPEQGALAGGTGNGIIITTFPTNARLFYNDVEITPESAP
IQNYQPALLSIDPDDGALTASFTYRQVDAAGLTSEPALAVIPFTDFTIGGRLFHDVNGVE
NNTIDGDPISSAGQTPLYANLVFRSNRVVAGSVPVVNGAFLFGTRNGLQANTSFFVVIST
LEGIAGTSIGATPLLPAGWQNTAEGSGTGDGIPNGAFELNTASETTPEISFGIQMPPVAY
PVTALTQVNPGGSKRLPVPALNGLDPEDGVLDGTVQPGTPGNRVRITSFPSNATLYYQDV
ALDTATALITNYDATRLFVDPDHGAMTITFTYREVDQGGLASDDALVTMPVTDLFVSGSV
YQDANGTTDNLLNGIRISQAGSASPLFVNLVNTAGQVVGSVPVNAGTFELGTAAGLESET
DFTLVLSATEGIAGTDTGAGSELPAEWANTADGAGTGDSNADGVLAFTMGSETVEGGFDF
GIEQLPTAGSGSHEMRNEPGDILIKIPADAFSNDIASSDPDGDVSSLRITSFPAGLAAIS
INGTSYRSNVPEEAESLTALLLPTDQSGNPSASMAIDPGLTTETRIDIPFEVVDNAGKAS
TNTGHAVFVLTAPLPVTLVHFDAVKEGNTALLTWATSEESNSQSFEIQHSADGITWAKAG
QVAAAGNSIHMKEYRFVHAQPLAGNNYYRLKMTDANASFAFSRIRTVDFGHAGEISIYPN
PARDIASIQLENWQQVSRVTIIDSRSNVVYTINNPENNKVNLQGYMSGMYLVRIERQDGS
FVVQKLVIEN
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgactccaatattccttaaaaagctttcaacatccttaaagctatacttattggttttt
ataggattgacatgtgtgcaatttgcagaggcgcaacctccatcggcatttacctatcct
tctccggtcgcctatgttgctaatgtgagcaatgtgtttatttctccaacagtttcagga
acagtagcacgctactccatgcccgcttctccggcactgcctgccgggctcacgttcgac
cccaatacgggtgtgatttcgggcgtacccactgaggcgctacctacaactgtgtacaca
gtgactgcaacaaatcagaatggaagtattagtactacttttacgatgacagtcacaaac
aattatcttaataacaataacaatcaactgcattttggtggagcaggtgttattatatca
catccaaatggtacctcttctgggcaggtagcaggagacatcacactttaccaaaatgta
accaacattaatggacaggcaatagattgtatcattactaccaaggaagtaaacaatgta
acttcctggacttcctatgaccaaccagaagtctctgggtcttctttcaactctaattta
cctgacttcttttcacctcaggttagctttggtacaaacggggggaatgtaagctacgag
ttccagtttatttttggtggtacctataacagcaccaccagagctgggcagaatgtcgtc
ttgcaaaatgtcaagctaaatacctatgacatcgatggaaatggtactgctggcgcgtta
cagtataatgaatttagtgggtttaccagcagtgagcttggtacttccccaacagtacaa
gctctctataataccgtaagtggtttaaccaggtttgtttctacatcttcggctaattca
acaatggttacagcggctgcaacccgcattcgggttacatacgccaacatgagcaacttt
tctatcgtagtgggctcgcaaggtgcaggactggcttttttctttttagacctgtcagtt
ggaccaacctttacctccgtcactacatcaagcccgtcggtagacctgaacacgagtata
gtaggtgtaggtaatgaaggtgcaggatgcgcaggaagtctacccctcacccgcccttcc
caaaccaacatcaatgcccagggtagcctcacaggcatggaagtaagctacccggcatcc
gacatccgcgacggcgctgccgagctgctgacggctgcgggcgctaccggcagcaatgta
ttgtccctgggttttacgacaggctcatcgggcacgctgaccataggcggggttaccttc
aattacaccaaaagcgtatcaggcgtgcagggagctgccaccaacaaaattgcatttaca
agaagcaccggcggcactaccttcaccagtgcagaagctgaaacgctgctcgatgcgctg
caatacagtaacacggcagccaatccgacgatcggggaccggcacctgtcggtactggta
tacaatgcggttttcaaaagtccgagcgccatgttctcggctacggtaaactgcgtaacg
ctggccggacatatctttaaagaccagaatggactactgggaacgaccgacttcaatacc
atcagcgcgaatgccaccacaggccagtttgccgcaggagcagcttacgcggtggtggtt
gacccggcaacaaaccaggttatcgaatcgcgcgcgattgctgcgggaggtgcatttaac
ttcggtacggttacgcccggcagctatttcctgtatgtatccgcaaccgcgccggcagcc
ggatccgtatttacgcaggccactttcccgtccggctacgtcagcgcgggcgaaaacctg
tcggctgcgcccggaagtgacctgcttaacgatggaaagctgatcgtgacggtaggcact
acgccggttaccaatgccaatttcggcctgaactcgccacccaccgccaatccgcttaat
gcagctgccctgcaaaatccgggtggaacgcagcgggtggtcgtgccggcactgacgggc
aatgatcccgagcagggagcacttgcgggcggcactggaaatggtattattatcacaact
tttcctacaaatgcccgcctgttttataacgatgttgaaattacccctgaaagcgcgccc
attcaaaactatcagccggccttgctgagcatagaccccgatgatggtgcgctgacggct
tcatttacctaccggcaggtggatgctgccggcctgacgagcgagcccgcactggcagtg
atcccatttaccgactttacgattggtggcaggctttttcatgatgtaaacggagttgag
aacaacacgattgatggcgaccccatcagctcagccggacaaacgcccctgtatgcaaac
cttgtgttccgctccaaccgggtggtagccggcagtgtacccgtcgtgaacggagccttt
ttgtttggaacacgcaatggtttacaggcaaataccagctttttcgtcgtgatcagcacc
ttggaaggtattgctggaacatctatcggggctactcccctgctgccggcaggatggcag
aatacagccgaaggatccggcacgggcgacggcattccaaatggcgcatttgaactgaat
actgcatcggagacgacgcctgaaatcagtttcggtatacaaatgccgccggttgcatat
ccggttaccgcactgacccaggttaatcccggcggcagcaaacggttgccggtacctgcc
ctgaacggccttgaccccgaggatggcgtactcgatggcacggtgcagcctggtacgccc
ggcaaccgggtacggatcacaagcttcccgtccaatgcaaccctctattaccaggatgtt
gcactcgacactgccactgcattgatcacgaactacgatgccacccgcctctttgtggat
ccggatcatggtgctatgacgattacatttacctaccgggaagtagatcagggcggactg
gccagcgatgatgcgctggtgacgatgcctgtcacagacctgtttgtaagcggcagcgtg
taccaggatgcaaatggcacgaccgacaacctgctcaatggcatacgcatcagccaggca
ggatcagccagtcccctttttgtaaatctggttaatacagccggtcaggtagtgggcagt
gtgccggtcaatgccggtaccttcgaattgggaactgccgcgggcctggaatcggaaacg
gattttacgctggtactttcggccacggagggcattgcggggacggatacgggtgccgga
tcggaactgcctgccgaatgggccaatacggcagatggcgccggaaccggggacagcaat
gccgacggagtactggctttcaccatgggatcggaaactgttgaaggtggatttgatttc
ggcattgagcagctgcccacagccggaagcggcagccatgagatgcgcaatgagccaggc
gatatcctgatcaaaattccagccgatgcattcagcaacgacatagccagctcagacccg
gacggtgatgtaagctcactgcgcatcacgtcatttcccgccgggttggccgctatttcc
atcaacggtacaagctaccgcagcaatgtgcccgaagaagcggaaagcctcacggcattg
ctgctccccacagaccagagcggcaacccctcggccagcatggccattgaccccgggctc
acaactgaaaccaggattgatattccatttgaagtggttgacaatgccggcaaggcaagt
accaatacgggtcatgcggtctttgtcctgactgcgcccctgccggttacgctcgtgcat
tttgatgcggtgaaagaaggaaatactgcactgctcacttgggctaccagcgaggaaagc
aacagccagtcttttgaaatccagcatagtgccgacggaatcacctgggcaaaagccggg
caggtagcggcagccggaaatagtattcacatgaaggaataccgatttgtgcatgcacag
cctttggcaggcaacaactattaccgcctgaaaatgacggatgccaatgcttcatttgca
ttcagcaggatcaggacggtagactttggtcatgcgggagaaatcagcatttatcctaac
cctgcgcgggatatcgcatccattcaactggaaaactggcagcaggtaagccgtgttacc
atcatagacagccgctccaatgtagtttatactatcaacaatccggaaaataataaagtc
aacttgcaaggctatatgtcgggtatgtatctagttcggattgaaagacaagatgggagc
tttgtagtacagaaactagtaatagaaaactga
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