Dyadobacter sandarakinus: HWI92_08140
Help
Entry
HWI92_08140 CDS
T07768
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWI92_08140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsn03019
]
HWI92_08140
Enzymes [BR:
dsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWI92_08140
Messenger RNA biogenesis [BR:
dsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWI92_08140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QRR00874
LinkDB
All DBs
Position
complement(2049404..2050639)
Genome browser
AA seq
411 aa
AA seq
DB search
MRFDDYSIAPEIKRSLEAGGFKRPTDIQFKAIPAIMKGEDVLAIAQTGTGKTAAFAIPII
DRLHREKSSARSEGIKCVVMVPTRELAIQITEVFAQLAKHTRVKPFSVFGGVEQGPQIAR
LEKGIDILVSTPGRMFDLVSQGYIKLNEVEVLVLDEADHMLDLGFIKDIRDLIKFLPGKR
QTLFFSATINENIKKLAYSLVRNAIRIQVSPKNPVAKNIRHSVAFIAMDDKRFFLERVIK
ENPDSKILVFVRTKVRAERVFAALERMGIGSLTIHGDKDQGDRLTAMNAFKKGDVKVLIA
TDVSARGIDIPNVDYVVNYDLPEQAENYVHRVGRTGRGIHKGTAVSFCAPEEEAVLEEIE
SFLDKPITRMDITSQAYSETLDFTSDSPNDLKSLMKEIEAMEQSRKKKKKL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgacgattatagtatagcccccgagatcaagaggagtctggaagccggtggt
ttcaagcgtcctactgatatacagtttaaggcgattcctgcgatcatgaaaggggaggac
gtactcgccatcgcgcagacagggaccgggaagaccgctgcatttgcaatcccgattatt
gaccggctgcatcgtgagaaaagctcggcacgttccgaggggatcaaatgtgtggtgatg
gtgccgaccagagaactggcgatccagatcacggaagtgtttgcgcagcttgcaaaacat
acccgggtgaaacctttcagcgtattcggaggggtagagcaggggccacagatcgccagg
ctggaaaagggcattgacatactcgtgtcgacgccggggcggatgtttgacctggtaagt
cagggttatatcaagctgaatgaggtggaagtacttgtgcttgacgaggctgaccacatg
ctcgacctcgggtttatcaaagatatccgtgacctcatcaagttccttccgggaaagcgg
caaacgctgtttttttcggctacgatcaatgaaaacattaaaaagctcgcctactcgctc
gttcgaaatgcaatcaggatacaggtttcgcccaagaatccggttgcaaaaaatatccgg
cattcggttgcatttattgcgatggacgacaagcggtttttcctggaaagagtgatcaag
gaaaatccggacagtaaaattctggtgtttgtcaggaccaaagtgcgggccgaacgtgta
tttgcggcgctggaacgcatgggaatcggcagtcttaccattcatggcgacaaagaccag
ggtgaccgccttactgccatgaatgcattcaagaaaggagacgtaaaggtgctgattgcc
acagacgtcagtgcgcgcggcatcgacattcccaatgtggattatgtagtcaactatgac
cttccggagcaggctgagaattacgttcaccgtgtgggacgtaccggtcgcgggattcac
aaaggtacagccgtatcattttgcgcgcccgaggaagaggcggttttggaggagattgaa
agctttctggataaacccatcaccagaatggacattacctcccaggcctactctgaaaca
ctggattttacctcagacagcccgaatgatctgaagtcgctgatgaaggagattgaggcg
atggagcaatcgcggaagaagaagaaaaagctttaa
DBGET
integrated database retrieval system
