Dyadobacter sandarakinus: HWI92_13075
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Entry
HWI92_13075 CDS
T07768
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dsn
Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsn03032
]
HWI92_13075 (gyrB)
03400 DNA repair and recombination proteins [BR:
dsn03400
]
HWI92_13075 (gyrB)
Enzymes [BR:
dsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HWI92_13075 (gyrB)
DNA replication proteins [BR:
dsn03032
]
Prokaryotic type
DNA Topoisomerases
HWI92_13075 (gyrB)
DNA repair and recombination proteins [BR:
dsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HWI92_13075 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QRR01775
UniProt:
A0ABX7I757
LinkDB
All DBs
Position
complement(3237110..3239065)
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AA seq
651 aa
AA seq
DB search
MSNETVIEVNSYSAENIQVLEGLEAVRKRPAMYIGDTGFKGVHHLIWEVVDNSIDEAMAG
YCDTIHVTIEKNNSITVQDNGRGIPTGMHPKEKKSALEVVLTVLHAGGKFDKDTYKVSGG
LHGVGVSCVNALSIHLRAEVHREGKVFEQEFSEGKPLYPTRVIGESEKTGTLIHFLPDST
IFTVTEFKYETVAGRLRELSYLNKGIRITLQDKREEDEDGKFRGEEFYSQIGLKEFVTYL
DATRQPLIPESIYMENDRGSIPVEVAMMYNTSYSENVFSYVNNINTIEGGTHVSGFRAAL
TRTLKNYAEKSGILAKEKVEISGDDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVTGAV
SQVVAEMLDTYLDEHPKEAKVIIDKVILAAKARIAAKKAREMVQRKNVLTGTGLPGKLSD
CSETDPNICELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAQEYRIYENEEIKN
MFTAMGVQIGKDGDERALNIDKLRYHKIVIMTDADVDGSHIRTLILTFFFRYMKILIDHG
YIYIAQPPLYLVRKGREERYCWTEQQREEAVREIGAGREDSVNVQRYKGLGEMNAEQLWE
TTMNPERRSLKQVSVESAAEADHLFSMLMGDEVAPRRDFIEKNAKYARVDV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaaacagtaattgaagtaaatagctattcagctgaaaatatccaggttctt
gaagggttggaggccgtacgcaagcgtccggccatgtacattggcgatacgggcttcaag
ggagttcaccacctgatctgggaagttgttgacaactccattgatgaggcgatggctggc
tactgtgataccatccatgttactatagaaaaaaataattcaattactgttcaggataat
ggccggggtattcctaccggtatgcaccccaaggaaaaaaagtcggcactggaagttgta
cttaccgttttgcacgccgggggtaaatttgacaaggatacttacaaggtttcgggaggt
ttgcacggtgtgggggtatcctgcgttaatgccctgtctatccacctgcgggcagaggta
caccgggaaggaaaagtgtttgagcaggagttcagcgaaggcaagcctttgtatccgacc
cgcgtgatcggagagtctgaaaagacgggtactctgattcactttctgcccgactcaacc
attttcacggttactgaattcaaatatgagaccgtagcgggacgcctgcgtgagttgtca
tacctcaacaaaggcatccgcattacactgcaagataaacgggaggaagacgaagacggt
aaattccggggcgaggagttttactcgcaaattggtctgaaagagtttgtgacctacctg
gatgctacccgtcagccgcttattcccgagtctatttacatggaaaatgaccgtggctcc
attccggtggaggttgcgatgatgtacaatacgtcttacagcgagaacgtattttcgtat
gtcaataatatcaataccattgagggcggtacccacgtgtcgggtttccgtgcggccctg
accagaacgctgaaaaactacgccgaaaaatcaggaatcctggccaaagaaaaagtcgag
atcagcggggacgatttccgggagggacttaccgctgtgatcagcattaaggtggccgag
ccgcagttcgaaggtcagaccaaaaccaagctcggtaactccgaggtgactggcgcggta
agccaggtagtagctgaaatgctggatacttacctggacgagcaccccaaggaagccaaa
gtgatcatcgataaagtgattctggcagccaaagcccgtattgcagcgaaaaaagcgcgt
gaaatggttcagcgcaagaacgtgctcacaggtaccggcctgcccggcaagctgtccgac
tgttctgaaactgatcccaatatctgcgagctttacctggttgaaggggactctgcgggt
ggtactgccaagcagggacgtaaccgcgcatttcaggcgatattgccactcaggggtaaa
atcctgaatgttgaaaaagcccaggagtaccggatttatgaaaatgaagagatcaagaac
atgtttaccgctatgggagtccagatcggtaaggatggtgacgagcgtgcattgaacatt
gacaagctgcggtaccacaagatcgtgatcatgaccgatgccgacgtggatggaagtcac
atccgtaccctgatcctgactttcttcttccggtacatgaaaatcctgattgatcacggc
tacatctatattgcccagccaccgctttaccttgttcgcaaaggccgcgaagagcgctat
tgctggaccgagcagcagcgtgaagaagccgtgcgcgagattggcgccggacgtgaggat
tccgtgaatgtacagcgttacaaaggtttgggtgaaatgaatgccgagcaactttgggaa
actacaatgaatcctgagcgccgcagccttaaacaggtttctgtggagtccgctgccgag
gccgatcacctgttctccatgctgatgggggatgaagtagccccaaggcgtgattttatt
gagaaaaatgcaaaatatgcacgtgttgatgtatag
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