Dyadobacter sandarakinus: HWI92_15045
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Entry
HWI92_15045 CDS
T07768
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dsn
Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsn03032
]
HWI92_15045
03400 DNA repair and recombination proteins [BR:
dsn03400
]
HWI92_15045
Enzymes [BR:
dsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HWI92_15045
DNA replication proteins [BR:
dsn03032
]
Prokaryotic type
DNA Topoisomerases
HWI92_15045
DNA repair and recombination proteins [BR:
dsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HWI92_15045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QRR02128
LinkDB
All DBs
Position
3725565..3726656
Genome browser
AA seq
363 aa
AA seq
DB search
MSEVSVIGTEEPIISARQIKKLKKDPAATAAAVGLNYITAGAPGYTRKGKSPRFFYLDSQ
GERVRDKSVIARIRALVLPPAWKEVWVSEDTEGHLQATGIDEAGRKQYRYHPHWNLIRNQ
TKYYRLLTFSEALPLLREQVERDLRHKEYDLQKVIALVIKLMDKTCIRVGNQRYKLKHGS
SGITTLDARAATVTGSRIRFVFTGKKGVKQDISLRDTQLARLVKTYKEMPGKRLFQYYSD
HGVKCSLNAHQVNDYIKEHTGAHFSAKDFRTWMGTVTAFEYLSVQEKYTTKRQLTRTLNT
CLDVVAAHLGNTRTVCKKYYVHPAVFRSYESGKITRLAGRDVEELTYFSPSEQRVKYLLS
HQT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtatcagttatcgggacggaagaaccaatcatttcagcaaggcaaattaaa
aaactgaaaaaagaccctgcggccacagcggctgcagtgggattgaactatatcacagcc
ggtgcaccaggctatacccgcaaaggcaagtcgccccgcttcttttacctggactctcag
ggcgagcgcgtacgtgacaaaagtgttattgcaaggatccgggcgctggtactgccgcca
gcctggaaagaagtgtgggtcagtgaggatactgagggccatttacaggctacgggcatt
gacgaggctggccgcaaacagtaccggtaccatccgcactggaacctgatccgcaatcaa
accaagtactatcgcctcctgacgttttcggaagccctgccgctgctgcgcgagcaggta
gagcgtgacctcaggcacaaggaatacgacctgcagaaagtaatagcactggtgataaag
cttatggacaaaacctgcatccgcgtgggtaaccagcgctacaagctaaaacacggttcc
tcaggaattaccacgctggacgcgcgcgctgccaccgttacaggcagcaggatccgtttt
gtttttaccggaaaaaaaggggtaaaacaggatatatccctccgcgatacacagctggcc
cgactggttaaaacatataaggaaatgccgggtaaaaggctttttcaatactactctgat
cacggggttaaatgctcgctgaatgcacaccaggtcaatgactacatcaaggaacatacg
ggagcacacttttcggccaaggatttcaggacctggatgggaacagtgacggcattcgag
tacctgtcggttcaggaaaaatataccaccaagcgccagcttacacgcacgctgaatacc
tgcctggacgttgttgcggcccacctcggcaatacgcgcactgtttgtaaaaagtactat
gtgcatcctgccgtattccggtcatacgaaagcggcaagatcacgcgccttgcaggacgg
gatgtggaagaactgacgtacttctcacccagcgagcagcgggtgaaatacctgctgtcg
catcaaacgtaa
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