KEGG   Dyadobacter sandarakinus: HWI92_15925
Entry
HWI92_15925       CDS       T07768                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
dsn  Dyadobacter sandarakinus
Pathway
dsn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dsn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HWI92_15925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsn03021]
    HWI92_15925
   03400 DNA repair and recombination proteins [BR:dsn03400]
    HWI92_15925
Enzymes [BR:dsn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HWI92_15925
Transcription machinery [BR:dsn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HWI92_15925
DNA repair and recombination proteins [BR:dsn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HWI92_15925
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: QRR02285
LinkDB
Position
complement(3953702..3954691)
AA seq 329 aa
MSILAFQMPDKVVMEKADDFHGLFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGIVEDVTEIILNLKMVRFKKVSDVSESRIVVNLKNVSVITAGDIGKFTNA
FDVLNPDQVICHIDDQKEFEMELLLDKGRGYVPADEPRANELPFGHIAVDSIYTPIKNVK
YSVENTRVEQRTDYERLLIDIQTDGSIHPEEALKGAANILIQHFMLFSDQTMTFEKQKAE
EDNQVDEEMLRMRKLLKTSLSELDLSVRAYNCLKSADVKSLGDLVKLEISDMMKFRNFGK
KSLTELEQLVADKQLTFGMDVSKYRLEED
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtcaatattagctttccaaatgcctgataaggtcgtcatggaaaaagcagacgacttt
cacgggttgtttgagtttaagcctttggagaaaggatatggagtaactataggcaacgcc
cttcgtaggatcctcttatcatctctggaaggatatgctataaccagtgtgaagtttcct
ggagtacttcatgaattttcgtctatcgaaggtatagttgaggatgttacagaaatcatc
ctgaaccttaaaatggttcgttttaagaaagtttctgatgtaagtgaaagtagaattgta
gttaacctgaaaaatgtttcagtgattacagcaggagatattggcaagtttaccaatgct
tttgatgtattaaacccggatcaggttatttgccatattgacgatcagaaggaatttgaa
atggaattgcttctggacaaaggccgcggatatgttccggctgatgagccaagagctaat
gagcttccttttgggcacattgcagtggattccatttacacaccgattaaaaatgtaaaa
tacagcgtagaaaatacgcgtgttgagcagcgcacggattacgagcgccttttgatcgat
atacaaacagatggttccatccatccggaagaggctcttaaaggtgctgccaatattttg
attcaacactttatgttgttctcggatcagacaatgaccttcgagaagcagaaagcggaa
gaggataatcaggtggatgaggagatgctgcgtatgcgtaagctgcttaaaacatctttg
tcagagctggatctttcagttagggcttataactgtcttaaatcagctgacgttaaatca
ttgggagatcttgttaagctcgaaatctcagatatgatgaagttccgcaactttggtaaa
aaatctttaacagagttggaacagcttgtagccgacaagcaattgacattcggcatggac
gtgtctaagtaccgtctcgaagaggattaa

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